Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958179
Help
Entry
101958179 CDS
T10664
Symbol
Son
Name
(RefSeq) protein SON isoform X1
KO
K23718
protein SON
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
iti03041
]
101958179 (Son)
Spliceosome [BR:
iti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101958179 (Son)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
DND1_DSRM
RSRP
dsrm
G-patch_2
Motif
Other DBs
NCBI-GeneID:
101958179
NCBI-ProteinID:
XP_013213236
LinkDB
All DBs
Position
Unknown
AA seq
2445 aa
AA seq
DB search
MAADIEQVFRSFVVSKFREIQQELSSGRSEGQLNGETNTPIEGNQAGDAGASARSLPNEE
IVQKIEEVLSGVLDTELRYKPDLKEASRKSRCVSVQTDPTDEIPTKKSKKHKKHKNKKKK
KKKEKEKKYKRQPEESESKPKSHHDGNIDLESDSFLKFDSEPSAMALEHPIRSFGLSESS
ESPTVMLEPPVVSMEVSEPHILETLKPATKTAELSVGSTSLISEQSVAATLEPSTTKILD
SFATAPATTVGLKSAEPVVTSVEYQTKSVLKSLESTSPEPSKIKLVVEPPVAKVQEPLDT
LVTASDTPTEVHPEPSTSTTVDFPESSATEVLRFPEQPVEVPSEIADSSMTRPQELLELS
KTTALELPESSVASVLELPGPPATSKSELQGPPVTPVLELPGPSATPVPELSGPLSTPVP
ELPGPPATAVPELPGPSVTPVPQLSQELPGPPAPSMGLEPPQEVPEPPVMAQELPGLPAV
SATVELPGQPAVTVAMELTEQPVTTTEFEQPVGMTTVEHPGHPEVTAATGLLGQPEATMV
LELPGQPVATTALELSGQPSVTGVPELPGLPSATRALELSGQSVAAGALELPGQLMATGA
LEFSGQSGAAGALELLGQPLATGVLELPGQPGAPELPGQPVATVALEISVQSVVTTSELS
TMTVSQSLEVPSTTALESYNTVAQELPATLVGETSVTVGVDPLMAQESHMLASNTMETHM
LASNTMDSQMLASNTMDSQMLASNTMDSQMLASSTMDSQMLASSTMDSQMLATSSMDSQM
LATSTMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSTMDSQMLATSSMDSQM
LATSSMDSQMLASGTMDSQMLASGTMDAQMLASGTMDAQMLASSTQDSAMLGSKSPDPYR
LAQDPYRLAQDPYRLGHDPYRLGHDAYRLGQDPYRLGHDPYRLTPDPYRMSPRPYRIAPR
SYRIAPRPYRLAPRPLMLASRRSMMMSYAAERSMMSSYERSMMSYERSMMSPMAERSMMS
AYERSMMSAYERSMMSPMAERSMMSAYERSMMSAYERSMMSPMADRSMMSMGADRSMMSS
YSAADRSMMSSYSAADRSMMSSYTADRSMMSMAADSYTDSYTDTYTEAYMVPPLPPEEPP
TMPPLPPEEPPMTPPLPPEEPPEGPALPTEQAALTAENTWPSEVSALPSEECVSQPEPAV
SQSEISEPPAVPANYSVTGSESSVLASEAVVTVPEPPPELESSVTSLPVESAVVAEEHES
IPERPVTCMVSEMPISSEPSMLTSEPPMMSEAAEAFDSMRAAGHVASEVSMSLLEPEPTE
SILELPGMAGPVPPAVAGTVPPVVAGPEPPAVAGPEPPAVAGPEPPAVAGPEPPPVAGPE
PPAVTELESQAVAVPEPPTMVEPEMVTIPVSVVSALEPSVPVLEPAVSFLQPAMIVSEPC
VSVQESTVTFSESAVTVSEQTQVTSAEMALVSTPVIVGSNVVSSHVMKGVTLLSGDQTFS
PDISMQEIPLHSGEEPHVEGHVKSDSYENEHGISTDLSINNYIIAKDMEHNTESIASTGP
VGETGEEKVLSMNETKQCSVLDICPGISEADVGGTLSSIGPLVLEPDTTETNKGIEFVTA
SALSSVSKYDEVSLTTQDTEHDMVISNSPSGGSEADIEGPLPAKDIHLDLTSSNLISKDT
EEPLPVRESDQILAVALSPKESSGEDKEVPLSTKEMSDSGFSANIDEINEADLVRPLLPK
DMERLTSLRAGIEGPLLASEAERDKSAASPVVTSVPERASESSSEEKDDYEIFVKVKDTH
EKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQ
TRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAVRA
RSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRT
PSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKRLTDLD
KAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEELTEKCKQIAQ
SKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTPPKSQVTLTKE
FPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVFSSNLPSEPVDISTAMSERALAQ
KRLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQLANTGAQAWIK
KDQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRKGLVAVGERAQ
KRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGSA
YQPSFASPNKKHAKATAATVVLQAMGLVPKDLMANATCFRSASRR
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacatcgagcaggtttttaggtctttcgtggttagtaaattccgggaaatc
caacaggagctttccagtggaaggagtgaaggccagctgaatggtgaaacaaacacacct
attgaaggaaaccaggcaggtgatgcaggtgcctctgccaggagcctaccaaatgaagaa
atagtgcagaagatagaggaagtgctttctggggtcttagatacagaactacgatataag
ccagatttgaaagaggcctccagaaaaagcagatgtgtatctgtacaaacagatcctact
gatgaaattcccaccaaaaagtcaaagaagcataaaaagcacaaaaacaaaaagaagaaa
aagaagaaagaaaaggaaaaaaagtacaaaagacagccagaagaatctgagtcaaagccg
aaatctcatcatgatgggaacatagatttagaatctgattcctttttaaagtttgattct
gaaccttcagcaatggcactggagcatcctataagatcatttggcctatctgagtccagt
gaatcccctacagttatgctggaacctcctgtagtatcaatggaggtttcagagccacac
atcttagaaactctgaagccagctacaaaaactgcagaactctcagttggatctacatca
cttatctcagaacagtctgtggcagcaacattggaaccatctacaacaaagattctggat
tcctttgcaacagcgcctgctacaacagtagggctgaagtcagctgagccagttgtaacg
tcagtggaatatcagacaaaatctgtgctgaaatctttggagagcacctctccagagcca
tcaaagatcaagttggtggtagagcctccagtagcaaaagtgcaagagccattagacacc
cttgtgaccgcatcagacacacctactgaggtgcaccctgaaccaagcacatcaacaaca
gtggattttccagagtcatctgcaactgaagtgctaagatttccagagcaacctgtagaa
gtaccatcggagattgcagattcatcaatgacaagaccacaggagttgctggagctgtct
aagaccacagcgttggagctgccggagtcatcggtagcctcagtgctggagttgccgggg
ccacctgcgacctccaagtcggagttgcaggggccccctgtgactccagtgctggagtta
cctgggccctctgctaccccggtgccagagttgtcagggcccctttctaccccagtgcct
gagttgccagggccccctgcgactgcagtgcctgagttgccggggccctctgtgacacca
gtgccacagttgtcgcaggaattgccagggcctccagcaccatccatggggttggagcca
ccacaggaggtaccagagccacctgtgatggcacaggagttgccagggctgcctgcagtg
tcagcgacagtagagttgccagggcagcctgcggtaacagtagcaatggagttgaccgaa
caacctgtgacgacgacagagttcgagcagcctgtggggatgacaacggtggaacatcct
gggcatcctgaggtgacagcagcaacagggttgctggggcagcctgaggcaactatggtg
ctggagttgccaggacagccagtggcaacaacagcgctggagttgtctgggcagccttcg
gtgactggggtgccagagttgccagggctgccttcggcaactagggcactggagttgtcg
gggcagtctgtggcagctggggcactagagttgcctgggcagctcatggcaactggggca
ctggagttctcagggcagtctggggcagctggagcactggagcttttggggcagcctctg
gcaacaggggtgcttgagttgccagggcagcctggggcgccagagttgcctgggcagcca
gtggcaactgtggcgctggagatctctgttcagtctgtggtgacaacatcggagctgtca
acgatgaccgtgtcgcagtccctggaggtgccctcgacgacagcgctggaatcctataat
acggtagcacaggagctgcctgctacattagtgggggagacttctgtaacagtaggagtg
gatcccttgatggcccaagaatcccatatgttagcttctaacaccatggagacccatatg
ttagcatccaacaccatggactcccagatgctagcatccaacaccatggactcccagatg
ctagcgtccaacaccatggactcccagatgttagcctctagcaccatggactcccagatg
ttagcctctagcaccatggactcccagatgttagcaactagttccatggactcccagatg
ttagcaactagcactatggactcccagatgttagcaaccagttccatggactcccagatg
ttagcaaccagctccatggactcccagatgttagcaaccagctccatggactcccagatg
ttagcaaccagcaccatggactcccagatgttagcaaccagctccatggactcccagatg
ttagcaactagttctatggattcccagatgttagcatctggcactatggattctcaaatg
ttagcttctggcaccatggatgcccagatgttagcctctggcaccatggatgcccagatg
ttagcctctagtacccaagattctgctatgttgggttcaaaatctcctgatccttatagg
ttagctcaggatccttacaggttagctcaggatccatataggttgggtcatgacccttat
aggttaggtcatgatgcttacaggttaggacaggacccctatagattaggccatgatccc
tacagactaactcctgatccctataggatgtcacctagaccctatagaatagcacccagg
tcctatagaatagcacctaggccatataggttagcacctagacccttgatgttagcatct
agacgttctatgatgatgtcctatgctgcagaacgttccatgatgtcatcttatgaacgc
tctatgatgtcttatgagcggtctatgatgtcccctatggctgagcgctctatgatgtca
gcctacgagcgctctatgatgtcagcctatgagcgctctatgatgtctcctatggctgag
cgctctatgatgtcagcctatgagcgttctatgatgtcagcttatgaacgctccatgatg
tccccaatggctgatcgatctatgatgtccatgggtgcagaccggtcaatgatgtcatca
tactctgctgctgaccggtctatgatgtcatcgtactctgcggctgaccgatctatgatg
tcatcttatactgctgatcgttcaatgatgtctatggcagctgattcttacactgattct
tacactgatacatatacggaggcatatatggtgccacctttgcctcctgaagagccccca
acaatgccaccattgcctcctgaggagccaccaatgacaccaccattgcctcctgaggaa
ccaccggaaggtcctgcattacccactgagcaggcagcattaacagctgaaaatacttgg
ccttcagaggtgtcagcattaccctctgaagagtgtgtatcacagcctgagcctgctgtg
agtcaaagtgagatttcagagcctccggcagtgcctgctaattattcggtgacaggatca
gagtcctcagtgttagcatcagaggcagttgtgactgttccagaaccaccaccagagtta
gagtcttcagttacatcactacctgttgagtctgcagtagtagcagaagaacatgaaagt
attccagagagaccagtgacttgtatggtatctgaaatgcccatttcatctgaaccatct
atgttaacatcagagcctcctatgatgtcagaggcagcagaagcatttgattccatgaga
gctgcaggacatgttgcctcagaggtatccatgtccctgttggagccagaaccaacagag
agcattctggagctaccgggcatggctggcccagtgcctcctgctgtggctggcacagtg
cctcctgttgtggctggcccagagcctcctgccgtggctggcccagagcctcctgccgtg
gctggcccagagcctcctgccgtggctggcccagaacctcctcctgtggctggcccagaa
ccaccagccgttactgagttagaatcacaagctgtagctgtaccagagcctcctaccatg
gttgagccagagatggttaccattcctgtatcagttgtgtctgccctggagccttctgtg
cctgttctggaaccagcagtgtcattccttcaacctgctatgattgtttcagaaccatgt
gtttctgtccaggagtccactgtgacattttcagagtctgctgtcactgtttcagagcaa
actcaagtaacatcagctgaaatggctttagtctctacaccagtgatagtgggatctaat
gttgtatcatcacatgttatgaaaggggtgactttattatctggtgatcaaactttttct
ccagacattagcatgcaggagattccattgcattcaggtgaagagccacatgtggaagga
cacgtgaaaagtgactcttatgaaaatgaacatggtataagtacagacctaagtataaat
aattatataattgctaaagatatggaacataatacagagtctattgctagcacaggtcct
gttggtgaaactggtgaagaaaaagttttgtccatgaatgagactaaacaatgctcagta
ttggatatctgccctggtattagtgaagctgatgtaggaggaacactatcttctattggt
cctcttgttctggaacctgatacaacggaaactaataagggtattgagtttgtgacagca
tctgctctcagttcagttagtaaatatgatgaggtatctttaactactcaagatactgaa
catgacatggtaatttccaacagccccagtggtggtagtgaagctgacatagagggacct
ttgcctgctaaagacattcaccttgatttaacatctagtaatcttattagtaaggataca
gaagaaccattacctgtgagagagagtgaccaaatattagcagttgctctcagccctaaa
gaaagtagtggagaagataaagaagtacctctctctactaaagagatgtctgattcagga
ttttctgctaacattgatgaaattaatgaagcagatttagtgagaccattacttcctaag
gacatggaacgacttacaagccttagagctggtattgaaggacctttacttgcaagtgaa
gctgaacgtgataaatcggctgccagtccagttgtaactagtgtaccagaaagggcttca
gagtcttcttcagaggaaaaagatgattatgaaatttttgtaaaagttaaggacacacat
gaaaaaagcaaaaaaaataagaaccgtgacaaaggtgagaaagagaaaaaaagagactct
tctttaaggtctcggagtaagcgttccaaatcttctgaacacaagtcccgtaagcgtacc
agtgagtctcgttccagggcaaggaaaagatcatctaagtccaagtctcatcgctcacaa
acacgttcacggtcacgttcaagacgcaggaggaggagcagcagatcaaggtcaaagtct
agaggtaggcgatctgtatcaaaagagaagcgcaaaaggtctccaaagcacagatctaag
tccagggaaagaaaaagaaaaagatcaagctccagggataatcgaaaagcagttagagct
cgaagtcgaaccccaagtcgtcggagtaggagtcacactcctagtcgtcgaagaaggtct
agatctgtgggtagaaggaggagttttagcatttcccccagccgaaggagccgcaccccc
agccgaaggagccgtacccccagccgaaggagccgcactcccagccgaaggagccgcacc
cccagccgtcggagaagatccaggtctgtggtaagaagacgaagctttagtatatcacca
gtcagattaaggagatcaagaacacccttgagaagaagatttagtagatctcccatccga
cgtaagagatccaggtcttctgaaagaggcagatcaccaaaacgtctaacagatttggat
aaggctcaattacttgaaatagccaaagctaacgcagctgccatgtgtgctaaggctggt
gttcctttaccgccaaacctgaagcctgcacctccacctacaatagaagagaaagttgct
aaaaagtcaggaggagctactatagaagaactaactgagaaatgcaaacagattgcacag
agtaaagaagatgatgatgtaatagtgaataaacctcatgtttcggatgaagaggaagaa
gaacctcctttttatcatcatccctttaaactcagtgaacccaagcccatttttttcaat
ctgaatattgctgcagcaaagccaactccgccaaaaagtcaggtaacactgacaaaagaa
tttcctgtgtcatctggatctcagcatcgaaaaaaggaagcagatagtgtttatggagag
tgggttcctgtagagaagaatggtgaagaaaacaaagatgatgataatgttttcagcagc
aatttgccctcagagcctgtggacatctctacagcaatgagcgaacgggcacttgctcag
aaaagactcagtgagaatgcatttgaccttgaagccatgagcatgttaaatcgagctcaa
gaacggattgatgcctgggctcagctgaactctattcctggacagttcacgggaagtaca
ggagtacaggttctaacacaagaacagttggccaatactggtgcccaagcctggattaaa
aaggatcagttcttaagagcagccccggtaactggaggaatgggagccgttttgatgaga
aaaatgggctggagagaaggagaaggattaggaaaaaacaaagaaggaaataaggaacct
atcctagttgattttaagacagaccgaaaaggtcttgttgcagtaggagaaagagcacaa
aagaggtctgggaatttctctgctgcaatgaaagatctgtcaggcaaacatcctgtatct
gccttgatggaaatttgtaataagagaaggtggcaaccacctgaatttctcttggtccat
gatagtggccctgatcatcgcaaacattttctctttagggtattgataaatggaagcgct
taccagcccagctttgccagccctaataagaagcatgctaaagccacagcagctactgtg
gttcttcaagcaatgggccttgtaccaaaggacctcatggctaatgccacttgcttcagg
agtgcctcacgtagatag
DBGET
integrated database retrieval system
