Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958225
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Entry
101958225 CDS
T10664
Symbol
Lrig1
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X2
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101958225 (Lrig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_5
LRR_1
V-set
LRR_9
LRR_14
C2-set_2
C2-set_3
LRRCT
Ig_5
Ig_C17orf99
LRRNT
Ig_4
LRR_NXF1-5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
101958225
NCBI-ProteinID:
XP_005335378
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MARPVRGALGAPRRSPCLLLLWLLLLLQLKPASAEAGPRAPCAAACTCVGDSLDCSGRGL
ATPPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLHNNELTAIPSLGAASPHVVS
LFLQHNRIRSVNGSQLKAYLSLEVLDLSSNNITEIRSACFPPGLYIRELNLASNRIGTLE
SGAFDGLSRSLLTLRLSKNRITQLPVKAFKLPRLTQLDLNRNRIRLIEGLTFQGLDSLEV
LRLQRNNISKLTDGAFWGLSNMHALHLEHNSLVEVNSGSLYGLTALHQLHLGHNSISRIH
RDGWNFCQKLHELNLSFNNLTRLDEESLAELGSLSVLRLSHNSISHIAEGAFKGLKNLRI
LDLDHNEISGTIEDTSGAFTGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLDLGKNAIR
SVQLDTFIKMRNLKELHISSDSFLCDCQLKWLPPWLESRTLQAFVTATCAHPESLKGQSI
FSVPPESFVCDDFPKPQIITQPETTTAVVGKDIRFTCSAASSSSSPMTFAWKKDNEVLAN
ADMENFAHVRAQDGEVMEYTTILHLRRVTFGHEGRYQCVITNHFGSTYSNKARLTVNVLP
SFTKMPRDIAIRTGTMARLECAATGHPNPQIAWQKDGGTDFPAARERRMHVMPDDDVFFI
TNVKIDDMGVYSCTAQNSAGSVSANATLTVLETPSLVVPLEDRVVSVGETVALQCKATGS
PSPRITWLKGNRPLSLTDRHHFTPGNQLLVVQNVVVEDAGQYTCEMSNTLGTERAHSQLS
ILPTPGCRKDGTTVGIFTIAVVCSIVLTSLVWVCIIYQTRKKSEEYSVTNTDETIVPPDV
PSYLSSQGTLSDRQETVVRSEGGHRANGHIESNGACLRDAGLFPEVDVHSITRRQPKLCV
GYSKEPWKVTEKATGTASPPKMELSVPLVCSDCNADVDSYSKEQAPHPQPTCRDSTQPSA
LRGQDPSQGDRGDSPHHPRSGAGDGSLYPSNHDRMLTSLRKPAVSLDGKGGSAWTLARLC
DADPAALQPCPAYPSGSMELPEASLAFPAVPSEAQHLLLSNGHLPQACDSSPESTPLTGQ
LPGKRRGPLLSAPTS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggccggtccggggagcgctcggggccccgcgccgctcgccttgcctcctgctc
ctgtggctgctgctcctgcttcagctgaagccggcgtcggccgaagccggcccgcgggcg
ccctgcgcggccgcctgcacttgcgttggggactcgctggactgcagcgggcgcggactg
gcgacgccgcccggggacctaccctcctggacacggagcctaaacctgagttacaacaaa
ctctctgagattgaccctgctggctttgaagacttgccaaatctacaggaagtgtacctc
cataacaatgagctgacagccataccgtccctgggtgctgcctctccacacgtggtgtct
ctctttctacagcacaacaggatccgcagcgtgaacgggagccagctgaaggcctacctt
tccttggaagtgttggatctgagttcgaataatatcacggagatccggagcgcctgcttt
ccccctggactgtacatacgagagctcaacctggccagcaatcgcatcggcaccctggag
tcgggagcattcgatggcctgtcacggtcgctgctgactcttcgcctgagcaaaaacagg
atcacccagcttcctgtaaaagcattcaagttacccaggctgacacaactggacctcaat
cggaatcggattcggttgatcgagggcctcacgttccagggcctggacagcttggaggtg
ctgaggctccagaggaacaacatcagcaagctgacggacggcgcgttctgggggctgtcc
aatatgcacgcgttacacctggagcacaacagcctggtggaagtgaacagcggctccctc
tacggcctcacggccctgcaccagctgcacctcggccacaactccatctcgcgcatccac
cgcgacggctggaacttctgtcagaagctgcatgagctgaacctgtccttcaacaacctc
acgcggctggacgaggagagcctggccgagctgggcagcctgagcgtcctgcgcctcagc
cacaactccatcagccacatcgccgagggcgccttcaagggactcaagaacctgcgcatc
ttggacctggaccataacgagatctcaggcacaatagaggacaccagtggcgccttcaca
ggcctcgacagcctcagcaagctgactctattcgggaacaagatcaagtccgtggctaag
agagcgttctcggggctggaaggcctggagcacctggacctgggaaagaatgccatcagg
tctgtgcagctggacacctttatcaagatgaggaatcttaaggagctccacatcagcagt
gacagcttcctgtgtgactgccagctcaagtggctgcctccatggctcgagagcaggaca
ctgcaggcctttgtgacagccacctgtgcccacccagagtcactgaagggccagagcatt
ttctcagtaccgccggagagtttcgtgtgtgacgacttcccaaagccacagatcatcacc
cagccagagacgaccacggccgtggtgggcaaggacatccggttcacgtgctcagcggcc
agcagcagcagctccccgatgacctttgcctggaagaaggacaacgaggttctggccaac
gccgacatggagaacttcgcccacgtgcgcgcgcaggacggggaagtgatggagtacacc
accatcctgcacctccgcagggtcacctttggccacgagggccgctaccagtgtgtcatc
accaaccactttggctccacctactctaacaaggcccggctcacggtgaacgtgctgcca
tcatttaccaaaatgccccgggacatcgccatccggactggtactatggctcgccttgag
tgtgcggccaccggccaccccaatccccagatcgcctggcagaaggacggaggcacagac
ttccctgcggctcgggagcgtcgcatgcatgtcatgccagacgacgacgtgtttttcatc
actaatgtgaaaatagatgacatgggggtttacagctgcaccgcccagaactcggcaggc
tctgtgtcagcgaatgccaccctgactgtcttagagaccccatccttggtggtacccttg
gaagaccgcgtggtgtctgtgggggagacggtggccctccagtgcaaagcgaccggcagc
ccctccccccgcatcacctggctcaaggggaaccgccccctgagcctcaccgacaggcac
cacttcaccccgggcaaccagctgctggtggtgcagaatgtggtggtggaggacgcgggc
cagtacacctgcgagatgtccaacacgctgggcacagagcgcgcgcacagccagctgagc
atcttgcccacgcctggctgcaggaaggacgggaccaccgtgggcatcttcaccattgcc
gtggtgtgcagcatcgtcttgacgtcgctggtgtgggtgtgcatcatctaccaaaccagg
aagaagagcgaggagtacagcgtcaccaacacagatgaaaccattgtaccaccagatgtt
ccaagctacctctcttctcaggggaccctttctgaccggcaagaaactgtggtcaggagt
gagggtggccatcgggccaacgggcacatcgagagcaacggtgcgtgtctgagagatgcg
ggcctcttcccagaggttgatgtccacagcatcacgcggaggcagcccaagctctgcgtt
gggtacagtaaagagccctggaaagtgacagaaaaagccactgggacagctagtccacct
aagatggaactcagtgtccctctggtgtgcagtgactgcaatgctgacgtggacagttac
tccaaggagcaggctccacaccctcagcccacatgcagggacagcacacagccaagtgca
ctgcgtggccaggatcccagccagggcgaccgaggagactctccacatcatcctcgcagt
ggggccggggacgggtccctctaccctagcaaccacgacagaatgctgacatccttgagg
aagccggcggtgtccctagatggaaaagggggctccgcctggactctagcgaggctgtgc
gacgcggaccccgcagccctgcagccctgccctgcttacccttcaggcagcatggagctc
ccagaggcctccctggcctttcctgctgtccccagcgaagcccagcacttgctcctttcc
aatggccacctcccccaggcatgtgactccagtcctgagtccacaccactgacaggacag
ctccctgggaaacggaggggaccattgttgtcggcgcccacaagctag
DBGET
integrated database retrieval system
