Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958285
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Entry
101958285 CDS
T10664
Symbol
Rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101958285 (Rnf40)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101958285 (Rnf40)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
101958285 (Rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
EzrA
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
ZapB
SpoIIE
Motif
Other DBs
NCBI-GeneID:
101958285
NCBI-ProteinID:
XP_013213381
UniProt:
I3M4Z2
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MSGPGNKRAAGDGGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDEIVEALLRCHESQREPSA
GMEAPGTQEGPTRDVIPLTEPGTSELREPLPMQLRPPLSEPALAFVVALGASSSEEVELQ
LQGRMEFSKAAVSRVVEASDRLQRRVEELCQRVYSRGDSEPPGEAARARTRELGRENRRL
QDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQMEL
QGAVRTNERLKVALRSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQASGSTHSIPNLGHPEDSGL
SAPTPGKEEGGPGPVGTPDSRKEMTSVSGATTTTSSVKKEELVPSEEDAQALTPGAQGPS
SRGREPEARPKRELREREGSGLGPPPVASGLSRVDREKAKMEEAKRKESELLKGLRAELK
KAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELEERDRRESKK
IADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLR
EKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQG
SLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREK
ESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVL
TKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggcccggcaacaaacgcgccgccggcgacgggggctcagggcctccagagaag
aagctgagccgcgaggagaagaccacaactactcttatcgaacccattcggcttgggggc
atctcctccacggaggagatggacttgaaggttctgcagttcaagaacaagaaactagca
gagcgtttggaacagcgacaagcttgtgaagatgaacttcgagaacgaattgaaaagttg
gagaaacgtcaggccacagatgatgccacactcctcattgtcaaccgctactgggcccag
ctagatgaaattgtagaagctcttctccgatgtcatgagagccagagggagccatctgca
gggatggaggcacctgggactcaggaggggccaacacgtgatgtgattcctctcacagag
ccaggaacatcagagctgagagagcccctgccaatgcagctgcgaccccctctcagtgag
ccagctttggcttttgtggtggcactaggtgccagcagcagtgaggaagtggagctacaa
cttcagggccgaatggagttctctaaggcagccgtgtcccgggtcgtagaggcctcagat
cgcctgcagcgccgtgtggaggaactgtgtcagcgagtatacagccgaggggacagtgag
ccccctggtgaggcagctcgagcacgcacccgggagctgggtcgtgagaaccggcggcta
caggacttggccactcagctgcaggagaagcaccaccgcatctcactggagtattctgag
ctccaggataaagtgacatcagcagagactaaggtgctagagatggagacgacagtggaa
gacttacagtgggacattgagaagctacgtaagcgggagcaaaagctcaataagcacttg
gcagaggcattggagcagctcaactctggctattatgtgtctgggagctcctcaggcttc
caagggggccagatcacactcagcatgcagaagtttgagatgttgaatgcagaattggag
gaaaaccaagaattggccaatagccgcatggcagagttggagaagctgcagatggaactt
cagggtgctgtgaggaccaatgaacgcctcaaggtggcccttcggagccttcctgaggag
gtggtacgggagacaggggagtaccgcatgctgcaggcccagttctcactactttataac
gaatctctacaagtgaagacccagctggatgaggcccgggggctgctgctggccaccaag
aactcccacttgagacacattgagcatatggagagtgatgagctgggactgcagaagaag
ctgcgcacagaggttattcagctagaagacaccttggcccaggttcggaaggagtacgag
atgttgcgcatcgagtttgaacagaacctggcagccaatgagcaggcggggcccattaat
cgtgagatgcgtcacctgattagcagtctccaaaatcacaatcaccaactaaaaggggat
gcccagcgatataagcggaagcttcgggaagtacaggctgaaattggcaagctccgggcc
caggctagtggctcaacccactccatccccaacctgggccatccagaggactctggcctc
agtgccccaaccccggggaaagaagagggtgggccaggtcctgttggtacccctgatagc
agaaaggagatgacgtcagtctctggtgccaccactactacctcctcagtgaagaaggag
gagctggtcccctccgaagaggatgcacaggccctaaccccaggggcccagggcccctcc
tcccggggccgagaacctgaagccaggcccaagcgggaacttcgggaacgggaagggtct
ggcctaggaccaccacctgtagcctcaggtctctcaagggtggatcgagaaaaggccaag
atggaagaagccaagaggaaggagtcagagctgctgaagggtctccgagcagagctcaag
aaggcccaggaaagccagaaggaaatgaagctgctgctagacatgtacaagtcggcaccc
aaggagcagcgggataaggtgcagcttatggcagctgaacgcaaggccaaggctgaggtt
gatgagctacggagccgcattcgggaactggaagaaagggatcgaagggagagcaagaag
attgcagatgaggacgccctgaggcgcattcggcaggctgaggaacagatcgaacaccta
cagcgcaaattgggtgccaccaaacaggaggaagaggctctgctgtcagagatggatgtg
acaggtcaggcttttgaggacatgcaggagcagaacgggcgactgctacagcaattgcgg
gaaaaggatgatgccaactttaagctgatgtcagagcggatcaaggccaaccagattcac
aagctgcttcgggaggagaaggatgagctgggcgagcaggttcttggcctcaagtcccag
gttgatgcccagctgctgaccgtgcagaaactggaggaaaaagagcgggccttacagggc
agcctagggggtgtggagaaggagctgactctgcgcagccaggccctagagctcaacaag
agaaaggctgtggaagcggcccagctagctgaggacctaaaggtgcagctggagcatgtg
cagactcggctgagagagatccagccatgccttgcagagagcagggctgctcgcgagaaa
gagagcttcaacctcaagagggctcaggaggacatctcacggctgcgacgcaagctagaa
aaacagaggaaggtggaggtgtatgcagatgctgatgaaatccttcaggaggagatcaag
gagtacaaggcgcggttgacctgtccctgctgtaacacccgcaagaaggatgcagtcctt
accaagtgcttccacgttttctgcttcgagtgcgtgcggggccgctatgaggcccgccag
aggaagtgccccaagtgcaacgcagcttttggtgcccatgacttccatcgtgtctacatc
agctga
DBGET
integrated database retrieval system
