Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958312
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Entry
101958312 CDS
T10664
Symbol
Ntn1
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101958312 (Ntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
iti00536
]
101958312 (Ntn1)
Glycosaminoglycan binding proteins [BR:
iti00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101958312 (Ntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
101958312
NCBI-ProteinID:
XP_005332963
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVSERGEERLR
SCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQFPHNVTLTLSLGKKFEVTYVSL
QFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTD
MRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELAR
DSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQR
ATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYR
DMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIA
PCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDYAVQIHILKADKAGD
WWKFTVNIISVYKQGTSRIRRGDQSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQSG
IVADKSSLVIQWRDTWARRLRKFQQREKKGKCKKA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctggccaagcggcgcagcccgacccctgctccgacgagaacggccacccgcgc
cgctgcatcccggactttgtcaatgcggccttcggcaaggatgtgcgcgtgtccagcacc
tgcggccggcccccggcgcgctactgcgtagtgagcgagcgcggcgaggagcggctgcgc
tcgtgccacctctgcaacgcgtccgacccgaagaaggcacatcctccagccttcctcacc
gacctcaacaacccgcacaacctgacgtgctggcagtcggagaactacctgcagttcccg
cacaatgtcacgctcacgctgtccctcggcaaaaagttcgaggtgacctacgtgagtctg
cagttctgctcgcctcggcccgagtccatggccatctacaagtccatggactacgggcgt
acgtgggtgcccttccagttctactccacgcagtgccgcaagatgtataaccggccgcac
cgcgcgcccatcaccaagcagaatgagcaggaggctgtgtgcaccgactcgcacaccgat
atgcgcccgctttcgggcggcctcatcgccttcagcacgctggacggacggccctctgcg
cacgacttcgacaactcgccggtgttgcaggactgggtcacggccaccgatatccgcgtg
gccttcagccgcctgcacacgtttggcgacgagaacgaggacgactcggagctggcgcgc
gactcgtacttctatgctgtgtcggacctgcaggtgggtggccgctgcaagtgcaacggc
cacgcggctcgttgcgtgcgcgaccgcgacgacagcctggtgtgcgactgcaggcacaac
acggccggcccggaatgcgaccgctgcaaacctttccactatgatcggccctggcaacgc
gccacagcccgcgaagccaacgagtgcgtggcctgtaactgcaacctgcatgcccggcgc
tgccgcttcaacatggagctctacaagctgtccggacgcaagagcgggggcgtctgcctg
aactgtcgtcacaacaccgctggccgccattgccactactgcaaagagggctactaccgt
gacatgggtaagcccatcacccaccggaaggcctgcaaagcttgtgattgccaccccgtg
ggcgccgctggcaagacctgcaaccaaaccactggccagtgtccctgcaaggacggtgtg
acgggcatcacctgcaaccgctgtgccaagggctaccagcagagccgctctcccatcgca
ccctgcatcaagattcctgtagcgccgccaaccaccgcagccagcagtgtggaggagcct
gaagactgcgattcctactgtaaggcctccaaagggaagctgaagattaacatgaaaaag
tactgcaagaaagactatgctgtccagatccacattctgaaggcagacaaggcaggggac
tggtggaagttcacggtgaacatcatctccgtgtacaagcaaggcaccagccgcatccgc
cgtggtgaccagagcctgtggatccgctcgcgtgacattgcctgcaagtgccctaaaatc
aagcccctcaagaagtacctactgctgggcaacgccgaggactcgccggaccagagtggc
atcgttgctgacaagagtagcctggtgatccagtggcgggacacgtgggcgcggcggctg
cgcaagttccagcagcgtgaaaagaagggcaagtgcaagaaggcctaa
DBGET
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