Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958368
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Entry
101958368 CDS
T10664
Symbol
Pola1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101958368 (Pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iti03032
]
101958368 (Pola1)
Enzymes [BR:
iti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101958368 (Pola1)
DNA replication proteins [BR:
iti03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
101958368 (Pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_alpha_N
DNA_pol_B_exo1
DUF1744
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
101958368
NCBI-ProteinID:
XP_040143666
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Position
X
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AA seq
1208 aa
AA seq
DB search
MLDPFDFQDVILFYFTENHFSEPESPYSYAPRSFPSSLRAPAQILRQAPLQSPTASFSSS
LPVSSQLQFFPKGSSQGAKCAPAGRPGAGRGAARHVSGLPGGSPQPPKPLIGFQAGAYLG
PRASFGLVGAESGDCGTMAPVHGDDCELGASGEGRLRTQNTGWECGDSSMIACGGGGGGV
FALFLPKEACAGFAVRVCLGSDLVVQGGGLSGVRTSILVGRLANPSHPLQGFLFGRLSHL
CQQVTPFKNSFAFKSNHFGEVPKKYINSAFRIEDFTSVYEEVDEEQYSKLVQARQDDDWI
VDDDLSKDELLGDILQDLNTEKPQITLPPIIIPKKKRSTGSSLNPFAVYTPKVKSYEDQY
NQPEQKIDLNTGKETEIPVTMKDVYDEFDERIAAKYKIMKFKSKGHNIYGFELEVLLQRI
NVCKVPHWSKIGRLKRSTMPKLGVIVVLKILFLLFATFYCVLTKKALHFFCFILTFLYSE
FSHLLYLLEHTWKDARFILQIMCELNVLPLALQITNITGNIMSRTLMGGXSEHNEFLLLH
AFYENNYIVPDKQIFRKPQQKLEDEDEEIDGDTNKYKKGQKKAAYAGGLVLDPKVGFYDE
FILLLDFNSLYPSIIQEFNICFTTVQRVASETQKVTEDGEQEQIPELPDPSLEMGILPRE
IRKLVERRKQVKQLMKQQDLNPDLVLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAA
LVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTNLEEVFKLGNKVKSEVNKLYK
LLEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQELKGLDIVRRDWCDLAKDTGNF
VIGQILSDQNRDIIVENIQKRLIEIGENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPH
VHVALWINSQGGRKVKAGDTVSYVICQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQ
QIHPVVSRICETIDGIDAVLIATWLGLDPTQFRVHHYHKDEENDVLLGGPAQLTDEEKYR
DCEKFKCPCPTCGTENIYDNVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQMSNKLIMDI
RRCIKKYYDGWLICEEAACRNRTRHLPLQFSRNGPLCPACMKAILKPEYSDKSLYTQLCF
YRYIFDVDYALEKLITDHEKEKLKKQFFTPKVLQDYRKLKNTAEQFLSWSGYSEVNLSKL
FADCAVKS
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgttagatccatttgattttcaggatgttatcctgttttactttacagaaaatcatttc
tcagaaccagagagcccctactcctacgcgcccagatcttttcccagtagcttgcgtgcg
cctgcgcagatcctccgccaagctcctttacagagcccgaccgcttctttctccagctct
cttccggtctcttctcagctccagtttttccctaaggggtcatcacagggcgccaaatgc
gcgcccgcgggaaggcccggggcggggcgcggcgcggcgcggcacgtcagtggccttccg
ggcggaagtccgcagcctcccaagcctctgattggctttcaggctggcgcctatctcggc
ccccgcgccagtttcgggctggttggcgcggaatcgggagactgcgggactatggcgcct
gtgcatggcgacgactgcgaactgggggcaagcggtgagggacgactccgcactcagaac
actggttgggagtgtggggacagcagcatgattgcgtgtggtggtggtggtggtggggtc
tttgctttatttcttccgaaggaggcgtgcgccgggttcgctgtgcgggtctgcttgggc
tcagaccttgtggttcagggcgggggcctttcgggtgtcagaaccagcattctagtaggg
cgacttgcaaatccgagccacccgttgcagggttttctgtttgggagactgtcacatctc
tgtcagcaagtgaccccttttaaaaattcctttgcgttcaaatctaatcattttggcgaa
gttcctaaaaaatacatcaattcagcatttcggatcgaggacttcacaagtgtttatgaa
gaagttgatgaagaacagtattcgaagctggttcaggcacggcaggatgatgactggatt
gtggatgatgatttgtctaaggatgaactgctaggtgacattctacaagatctgaacact
gagaaacctcaaataactcttccacctataataatacctaagaagaaaagatctactgga
tcttctctgaatccttttgctgtgtacacccccaaggtaaagtcttatgaagatcagtac
aaccaaccagaacagaaaattgatctaaatacagggaaggaaacagaaattccagttaca
atgaaggatgtttacgatgaatttgatgaaagaatagcagcaaaatataaaattatgaag
ttcaagtccaagggtcataatatttatgggtttgaactggaagtgctactgcagcgaatt
aatgtgtgcaaagttcctcactggtccaagataggtcgtctgaagcgatccaccatgcca
aagcttggggtaatagtagttttgaaaatcttatttcttttatttgccactttttattgt
gtacttaccaagaaagcactacactttttttgtttcattcttacttttctgtacagtgaa
ttttctcatctgttgtacctgttggaacacacctggaaagatgccaggttcattttgcag
attatgtgtgagctaaatgttcttccattagcattgcagatcactaacatcactgggaac
attatgtccaggacactgatgggtggatgatctgagcataacgagttcttgttgcttcat
gcattttatgaaaacaactatatcgtgcctgacaagcagattttcagaaagcctcagcaa
aaactggaagatgaagatgaagaaattgatggagataccaataaatacaagaaagggcag
aagaaagcagcttatgctggaggcttggttttggaccccaaagttggtttttatgatgag
tttattttgctgctggacttcaacagtttatacccttccatcattcaggaatttaacatt
tgttttacaacagtgcaaagagttgcttcagagacacagaaagttacagaggatggagaa
caggaacagatccctgagttgccagatccaagcttagaaatgggcattttgcccagagaa
atccggaaactggtagaacggagaaaacaagtcaaacagctaatgaaacagcaagattta
aacccagatcttgttcttcagtatgacattcggcagaaggctttgaagctcacagcgaac
agtatgtacggttgcctgggattttcctacagcagattttacgccaaaccactggctgcc
ttggtgacatacaaaggaagggagattttgatgcatacaaaagagatggtacagaagatg
aatcttgaagttatttatggagatacagattcaattatgataaacaccaatagcaccaat
ctggaagaagtatttaagttgggaaacaaggtaaaaagtgaagtgaataagttgtacaaa
ctgcttgaaatagacattgatggtgttttcaagtctctcctactactgaagaaaaagaaa
tatgctgctctggttgttgaaccaacatcagatgggaattacgttaccaaacaggagctg
aagggattagatatagttagaagagattggtgtgatcttgctaaagacactggaaacttt
gtcattggccagattctttctgatcaaaaccgggacattatagtagaaaatattcagaag
aggttaatagaaattggagaaaatgtgctaaatggcagtgtcccagtgagccagtttgaa
attaacaaggcattgacaaaggatccccaggattaccctgataagaaaagcctacctcat
gtacatgttgccctctggataaattctcaaggaggcagaaaggtgaaagctggagatact
gtgtcatatgtcatctgtcaggacgggtcaaacctcactgcaagtcagagagcctatgca
cctgaacaactgcaaaaacaggacaatttaaccattgacacccagtactacctggcccag
cagattcacccagttgtgtcacgaatctgtgagacaatagatggaattgatgcagtgctc
attgcaacatggttaggactagaccccacccaatttagagttcatcattatcataaagat
gaagagaatgatgttctacttggtggcccagcacagctcactgatgaagagaaatacaga
gactgtgaaaaattcaaatgtccatgtcctacatgtggaacggaaaatatttatgataat
gtctttgatggctcgggaactgatatggagcccagcttgtatcgttgcagcaacattgat
tgtaaggcttcacctctgacctttacagtacagatgagcaacaaattgatcatggacatt
agacggtgcattaaaaagtactatgatggctggttgatatgtgaggaggcagcatgtcgc
aatcgaactcggcatcttccccttcaattctcccgaaatggtcctctttgtccagcatgc
atgaaagctatacttaaacctgagtattctgacaagtccctgtacacccagctgtgcttt
taccggtacatttttgatgtggactatgcactggagaaacttattaccgatcatgagaaa
gaaaaattgaagaagcagttttttacacccaaagttcttcaggactacagaaaactcaag
aacacagccgagcagttcttgtcctggagtggctactctgaagtgaacctcagcaaactc
ttcgccgattgtgctgtgaagtcctaa
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