Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958487
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Entry
101958487 CDS
T10664
Symbol
Fars2
Name
(RefSeq) phenylalanine--tRNA ligase, mitochondrial isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101958487 (Fars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
iti01007
]
101958487 (Fars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iti03016
]
101958487 (Fars2)
Enzymes [BR:
iti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
101958487 (Fars2)
Amino acid related enzymes [BR:
iti01007
]
Aminoacyl-tRNA synthetase
Class II (U)
101958487 (Fars2)
Transfer RNA biogenesis [BR:
iti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101958487 (Fars2)
Prokaryotic type
101958487 (Fars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
101958487
NCBI-ProteinID:
XP_005327549
UniProt:
I3MIM8
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MMVCSALRRAAHAHVCLVRKISPVSRSHQHHVWGSRPAASEFVAQGAPGSVTELLGKSYP
QDDHTNLTQKVLSRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGRSGTPLFSVYDDLCPV
VTTWQNFDSLLIPAHHPSRKKGDNYYLNRTHMLRAHTSAHQWDLVHAGLDAFLVVGDVYR
RDQIDSQHYPVFHQLEGVRLFSQHELFADIKDGDCLKLFEQSSRSAHKQETHTMEALKLV
EFDLKQTLSRLVTYLFGDGLEIRWVDCYFPFTHPSFEMEINFHGEWLEVLGCGVMEQQLV
NSAGAQDRMGWAFGLGLERLAMILYDIPDIRLFWSEDERFLKQFRISDINQKVKFQPLSK
YPAVINDISFWLPSENYTENDFYDLVRTIGGDLVEKVDLIDKFEHPKTNRTSHCYRITYR
HMERTLSQREVTHVHQSVQEAAVQLLGVEGRF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatggtttgttcagctctcaggagggctgcccatgcacacgtctgcctggtgaggaag
atcagtcctgtcagcagaagccatcagcatcatgtgtggggttccaggccggctgcatca
gagtttgttgcccaaggagctccaggcagtgtcacagagttgctgggcaagtcctaccct
caggatgaccataccaacctcacccagaaggtcctgtccagagttgggaggaacctgcac
aaccagcagcaccaccctctgtggctgatcaaggagagagtgaaggagcacttctacaag
cagtatgtgggccgctctgggacaccactattctcggtctatgacgacctatgtccagtg
gtcaccacctggcagaactttgatagcctgctcatcccagctcaccaccccagcaggaag
aagggggacaattactacttgaatcgaactcacatgctgagagcacacacttctgcacac
cagtgggacttggtgcatgcaggactggatgccttcctggtggtgggtgatgtctaccgg
cgtgaccagattgactcccagcactacccagttttccaccagttggagggtgttcggctc
ttctcccagcatgagttatttgctgatataaaggatggagactgcctgaagctctttgaa
caaagttctcgctctgctcataagcaagagacacataccatggaggccttgaagcttgta
gagtttgaccttaagcaaactctcagcaggcttgtgacatacctgtttggagatgggttg
gagataagatgggtggactgctactttccttttactcatccttccttcgagatggagatc
aacttccacggagaatggctagaagttcttggctgtggggtgatggaacaacaactggtc
aattcagctggtgctcaagatcgaatgggctgggcttttggcctggggttagaaagactg
gccatgatcctctatgacatccctgatatccgcctcttctggagtgaggacgagcgcttc
ctgaagcagttccgcatctcggacattaatcagaaggtgaagttccagcctctcagcaaa
taccctgccgtgataaatgacatctcattctggttgccctctgagaattacacagagaac
gatttctatgacttagtccgaacaattggaggagacctggtggaaaaggttgatcttata
gacaagtttgaacatccaaagaccaacaggaccagccactgttaccgcatcacctatcgc
cacatggaacggacactgtcccagagagaggtcacacacgtccatcagtctgtgcaggag
gccgcagtgcagcttctgggcgtggagggtcggttttga
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