Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958539
Help
Entry
101958539 CDS
T10664
Symbol
Ykt6
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04130
SNARE interactions in vesicular transport
iti04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101958539 (Ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101958539 (Ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101958539 (Ykt6)
Membrane trafficking [BR:
iti04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
101958539 (Ykt6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
101958539
NCBI-ProteinID:
XP_005319294
UniProt:
I3LWN0
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MKLYSLSVLYKSEPKAVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSAKGSRASVK
EQEYLCHVYVRNDNLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVESINWPVGSPATINY
TALDGHLSRYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQ
SKAFYKTARKQNSCCAIM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtacagccttagtgtcctctacaaaagcgaacccaaagcagtactgctcaaa
gccgcttacgacgtgtcttctttcagtttcttccagaggtccagtgttcaggaattcatg
accttcacaagtcaactaattgtggagcgctcagcgaaaggcagcagagcttctgtcaaa
gaacaagagtatctgtgccatgtctatgttcggaatgacaatcttgcaggtgtggtcatt
gctgacagtgaatacccatcccgggtggcctttaccttgttggaaaaggtactagatgaa
ttctccaagcaggttgaaagtataaactggccagtaggatcccctgctacaatcaactac
acagccctggatggtcaccttagtagataccagaacccccgagaagctgatcccatgagt
aaagtacaggctgaacttgatgagaccaaaatcattctgcataacaccatggagtctttg
ttagagcgaggcgagaagcttgatgacttggtgtccaaatcagaagtactgggaacacag
tccaaagccttctataaaactgcccggaaacaaaattcatgctgtgcgatcatgtga
DBGET
integrated database retrieval system
