Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958598
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Entry
101958598 CDS
T10664
Symbol
Cldn5
Name
(RefSeq) claudin-5
KO
K06087
claudin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03272
Virion - Hepatitis viruses
iti04382
Cornified envelope formation
iti04514
Cell adhesion molecules
iti04530
Tight junction
iti04670
Leukocyte transendothelial migration
iti05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
101958598 (Cldn5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101958598 (Cldn5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101958598 (Cldn5)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101958598 (Cldn5)
09158 Development and regeneration
04382 Cornified envelope formation
101958598 (Cldn5)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
101958598 (Cldn5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
iti03037
]
101958598 (Cldn5)
04147 Exosome [BR:
iti04147
]
101958598 (Cldn5)
Cilium and associated proteins [BR:
iti03037
]
Other cilia and associated proteins
Stereociliary proteins
101958598 (Cldn5)
Exosome [BR:
iti04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
101958598 (Cldn5)
Exosomal proteins of colorectal cancer cells
101958598 (Cldn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
101958598
NCBI-ProteinID:
XP_005334590
UniProt:
I3N2D3
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MAAYGLAAVVCEFGSRKQNPPPETSKGGPPRGPSRVEAVPQARRVSRLLLVRWLSGRKRT
RVPGWTQCAESHRQSSEARSGSPRGQSARTSPPDMGSAALEILGLVLCLVGWVGLILACG
LPMWQVTAFLDHNIVTAQTTWKGLWMSCVVQSTGHMQCKVYESVLALSTEVQAARALTVS
AVLLALVALFVSLAGAQCTTCVAPGPAKARVALTGGVLYALCGLLALVPLCWFANIVVRE
FYDPAVPVSQKYELGAALYIGWAASALLMCGGGLVCCGAWVCAGRPDLSFPVKYSAPRRP
TASGDYDKKNYV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtatggattggctgctgtggtctgtgagtttgggtccaggaagcagaatccg
ccccccgagacttcaaaaggtgggcccccaagaggccccagcagagttgaggcagtgccg
caggcccgcagggtaagcagactgctattggtgaggtggctgagtgggcgcaaacgaacc
agggtaccagggtggacgcagtgcgccgagtcgcatcgccaaagcagtgaggctcgctcc
gggagccccaggggccagagcgcgcgcacctcgcctccagacatggggtcggcagcatta
gaaattttgggtctggtgctgtgcctagtgggctgggtaggcctgatcctggcatgcgga
ctgcccatgtggcaggtgaccgccttcctggaccacaacatcgtgacagcgcagaccaca
tggaaggggctgtggatgtcatgcgtggtgcagagcacagggcacatgcagtgcaaggtg
tatgagtctgtgctggcattgagcaccgaggtgcaggcggcgagggcgctcaccgtcagc
gcggtgctactggcgctggttgcgctcttcgtaagcctggcgggcgcacagtgcactacc
tgtgtggccccaggcccagctaaagcccgagtggctctcacaggcggcgtgctttatgcg
ctgtgcgggctgctggcacttgtgccactctgctggttcgccaacatcgtagtccgtgag
ttctacgacccggcggtaccagtgtcacagaagtatgagctgggtgcagctttgtacatc
gggtgggcggcctctgctttgctcatgtgcggtggcggcctggtgtgctgcggagcctgg
gtctgcgctggccgcccggacctcagctttccagtcaagtattctgcgccacggcggccg
acggccagcggtgactacgacaagaagaactacgtctga
DBGET
integrated database retrieval system
