Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958666
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Entry
101958666 CDS
T10664
Symbol
Pcdh12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101958666 (Pcdh12)
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Protocadherins
101958666 (Pcdh12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
101958666
NCBI-ProteinID:
XP_005324292
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MMPLLQLLLGLFGPGGYLFLSGDCQEVATLTVKYQVTEEVPPGTVIGKLSRELGREERHG
QTGAAFQVLQLPQALPIQVDAEDGLLSTGRRLDREQLCRQRDPCLVSFDVFATGDLTLIH
VEIQVLDINDHQPQFPKGEQELEISESASLHTRIPLDRALDPDTGPNTLYSYTLSPSEHF
ALDVIMGPDETKHAELVVVKELDREVHSFFDLVLTAYDSGNPPKSGTSLVKVNVLDSNDN
SPVFAESSLALEIREDAAPGTLLINLTATDPDQGPNGEVEFFLGKHVPLEVLHTFSVDAK
TGQVILRRPLDYEKNPAYEVDVQARDLGPNPIPAHCKVLIKVLDVNDNAPSIHITWASQP
SLVSEALPKDSFIALVMADDLDSGNNGLVHCWLNQELGHFRLKRTNGNTYMLLTNATLDR
EQWPRYTLTLLAQDQGPQPLSTKTQLSIQISDANDNAPVFEKSRYEVSTRENNLPSLHLI
TIKAHDADLGSNGKISYRIQDSPVSHLVAIDSDTGEVTAQRSLDYEEMSGFEFQVIAEDR
GQPKLASSISVWVSLLDANDNAPEVIQPVLSNGKASLSVLVNASTGHLLVPIETPRGLGP
AGAGLPPLATPSSQPFLLATIVARDADSGANGELLYSIRSGNEAHLFVLSPNLGHLFINV
TNASSLIGSQWELEILVEDQGSPPLQTRALLRVMFVTSVDHLRDSAHEPGVLSTSVLTVI
CLTVLLAIFGSILALFVSICRTEKKDNRAYNCREAESTYRHQPKRPQKHIQKADIHLVPV
LRGQADDSGEVEQSHKDTGKEAMMEAGWDPCLQAPFHLTPTLYRTLRNQGNKGTLAESQE
VLPDTVSLLFNHPRQRNASRENLNLPESPSTPGQPRARPLKVAGSPMGRLAGDQSSEGTP
LSPPTSSATLRRQRNLNGKVSPEKESGPHQILRSLVRLSVAAFAERNPVEELTVDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPGSGRSAIPDTDGSGARAGGQAEPDQEEGPLD
PEEDLSVKRLLEEELSSLLDPHTGLALDRLSAPDPAWMARLSLPLTTNYRDNVFSPDTAA
LEEPRTFQTFGKEAGPELSPTGTRLASTFLSEMSSLLEMLLEQRSSVPVEAASEALRRLS
VCGRTLSLDLATSAALGTETQGAQVERKGLRAGPVAASAGERTLEASISKNQVP
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgatgccacttctgcaacttctgctggggcttttcgggccaggtggctacttgttcctt
tcaggggattgtcaggaggtagccactctcacagtgaaataccaagtgacagaggaggtg
ccacctggtacagtgatagggaagctgtcccgggaactgggccgggaggagaggcacggg
cagacaggggctgccttccaggtcttgcaactgccccaggcgctccccattcaggtggac
gctgaggatggcttgctcagcactgggaggcggctagatcgagaacagctgtgccggcag
cgggatccctgcctggtttcctttgatgtgtttgccacaggggatctaactctgatccac
gtggagatccaagtgctggacatcaatgaccaccagccacagtttcccaaaggagagcag
gagctggaaatctctgagagtgcctctctgcacacacgaatccccctggacagagctctt
gatccagacactggccctaacacgctgtactcttatactctgtctcccagtgagcacttt
gccctggatgtcatcatggggcctgatgagaccaaacatgccgaacttgtggtggtgaag
gagctggaccgggaagtccactcgttttttgatctggttttaactgcctatgacagtggg
aaccctcccaagtcaggcaccagcttagtcaaggtcaatgtcctagactccaatgacaat
agccctgtttttgctgagagttcactggcattagaaatccgtgaagatgctgcccctggc
accctcctcataaacctgaccgccacggaccctgaccaaggccccaatggggaggtagag
ttcttcctcggcaagcatgtgcctctagaggtactacacaccttcagtgttgatgccaag
acaggccaggtcattctgcgccgacccctggactatgagaagaatcctgcctatgaggta
gatgtccaggcaagggatctgggtccaaatcccattccagcccactgcaaagttcttatt
aaggtcctggatgtcaatgacaatgctcccagcatccacatcacgtgggcctcgcagcca
tctctggtgtcagaagctcttcccaaggacagtttcattgctcttgtcatggcagatgac
ttagactcaggaaacaatggcctggtccactgttggctgaatcaagagctgggccacttc
agactgaaaaggactaatggcaacacatatatgctgctaaccaatgccactctagacagg
gagcagtggcccagatataccctaactctgttagcacaggaccaaggaccccagcccttg
tctaccaaaacacagctcagcattcagatcagtgatgccaacgacaatgcacctgtattt
gagaagagccggtacgaggtctccactcgggagaacaacctgccctcccttcacctcatc
accatcaaggctcatgacgcagacttgggcagtaatgggaaaatctcataccgcatccag
gactccccagtttctcacttagttgctattgactcagacactggagaggtcactgctcag
aggtcactggactatgaagagatgtctggctttgaattccaggtgatagcagaggacaga
ggccaacccaagcttgcatccagcatctctgtgtgggtcagcctcttggatgccaacgat
aatgccccggaagtgattcagcctgtgctcagcaatggaaaagccagcctctcggtgctt
gtaaatgcctccacaggccatcttctggtgcccatcgagactcccagaggtttgggtcca
gcaggtgctggcttaccacctctggccactcccagctcccagccatttcttttggcaacc
attgtggcaagagatgcagactccggggcgaatggagagctcctctacagcatccgaagt
ggaaatgaagcccatctctttgtcctcagccctaatctggggcatctattcatcaatgtc
actaatgccagcagcctcattgggagccagtgggagttggagatactggtagaggaccaa
ggcagtccccccttgcagacccgagccctgttgagggtcatgtttgtcaccagtgtggac
cacctaagggactctgcccatgagccgggggtcctgagcacatcggtactgactgtgatt
tgcctgactgtattactagccatcttcgggtcaatcttggctctgttcgtgtccatctgc
cgaacagagaagaaggacaacagggcctacaactgtcgggaagctgagtccacttatcgc
caccagcccaagaggccccagaaacacattcagaaggcggacatccacctggtgcccgtg
ctcaggggccaggcagatgactctggtgaagtcgagcagtcccacaaagacacaggcaag
gaagcaatgatggaagcaggctgggacccctgcctacaggccccttttcacctcacacca
accctgtacaggaccctgcgtaaccaaggcaacaaggggacactggcagagagccaagag
gtgctgccggatactgtcagtctccttttcaaccatcccaggcagaggaatgcctcccgg
gagaacctgaaccttcctgagtctccatctaccccaggccagccacgtgccaggcctctg
aaggttgcaggcagccccatggggaggctggctggagaccagagcagcgaggggaccccg
ctgagcccacccacctcctctgcaaccctgaggcggcagcggaatctcaatggcaaagtg
tcccctgagaaagaatcgggcccccatcagattctgcgaagcctggtccgattatctgtg
gctgcctttgcagagaggaatcccgtggaggagctcactgtggattctcctcctgttcag
caaatctcccagctgctgtccttactgcatcagggccaattccagcccaaaccaaaccac
cggggaaataagtacttggccaagcccggcagcggcaggagtgcaatcccagacacagat
ggctcaggtgccagggctggtggccaggcagaaccagaccaggaggaagggcccttagat
cctgaagaggacctctctgtgaagcggctgcttgaagaagagctgtcaagcctgctggat
ccacatacaggcctggccctggaccgactgagcgcacctgacccagcctggatggcgagg
ctgtctttgcccctcaccaccaattacagagacaatgtgttctcccctgacactgcagcc
ctggaggagccaaggaccttccagacgttcggcaaggaggcagggcctgagctgagcccc
acgggcacacggctggccagcaccttcctctcagagatgagctcgctgctggagatgctg
ctggagcaacgctccagtgtgccagtggaggctgcctccgaggccctgcggcggctctcc
gtctgtggaaggaccctcagtctagacctggccaccagtgcggccttgggcacagaaaca
cagggggcccaggtggaaagaaaggggctgagggcaggaccagtggcggcaagtgccggg
gaacgcaccttggaggcctccatatctaagaaccaggtcccctag
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