Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958675
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Entry
101958675 CDS
T10664
Symbol
Ppl
Name
(RefSeq) periplakin
KO
K10386
periplakin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101958675 (Ppl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101958675 (Ppl)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
101958675 (Ppl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
Spectrin
FapA
Motif
Other DBs
NCBI-GeneID:
101958675
NCBI-ProteinID:
XP_021583305
LinkDB
All DBs
Position
Unknown
AA seq
1756 aa
AA seq
DB search
MNSLFRKRNKGKYSPKVQTRSISNKELSELIEQLQKNADQVERNIVDTGAKMQSDLARLQ
EGQQPEHRDVALQKVSDSEKLLYVLEADAAIAKHMKHPQGDMIAEDIRQLKERVANLREK
HKQIYNLAAKEVAPEVNWAALVEEKLDKLNGQSFGTDLPLVDSQVEQHNIFHNEVKAIGP
HLAKDGDKEQNSELQAKYQKLLAASQARQQHLSSLQDYMQRCTNELYWLDQQARDRVQYD
WSDRNLDYPSRRRQYENFINRNLEAKEERINKLHSEGDQLLAAEHPGRNAIEAHMEAVHA
DWKEYLNLLICEESHLKFMEDYHQFRRDVQDAQELLRKVDSDLNQKYSPDFKDRYQIELL
LRELDDQEKALDKYQDVVRGLQKRGQQVVPLKYRRETPLKPIPVEALCDFEGDQGPISRG
YSYTLQKNNGESWELTDAAGDKLSAPAVCFMIPPTDPEALALADSLDSQYRSLRQKAAGS
RQALQQRHEVLKTENPGDASDLQGRQLLASLDKVASDLDRQEKAITGILRPPLEQGRAVQ
DSAERAKDLKNITNELRRIEPEKAQSTAECAAFVEALPGSGTAPLLKARVEDTSQKYERL
VQLLDLAQEKVDVANRLERSLQQGRELLATHENRLAQDDTVPESGRVLDNKRQELEAMAS
ELQAQKSLLGEVERNLQEAKRCSSSLASCFQEHCPDLERQEAEAHKLSQRFDNLRQQVEH
RAQSLQGAKAAYEEYHRGYDRVLQFLSSTPSYEPQETDSLSQMETKLKNQKNLLDEIASR
EEEVQKVYANSQQYQQAVKDYELEAEKLRSLLDLENGSNSHVSKRARLQSPAAKVKEEEA
ALAAKFTEVQAINRQRLQNLEFALNLLRQQPDTEVTRETLQGNNLGSSVEETWKIKKELD
EEAERRQQLENEVKSTQEEIRTLRNQGPQESLVRKEVLKKVPDPALEESFQQMQRTLAEE
QHKNQLLQEELEALQLRLRALEQETRDGGQEYVVKEVLRIEPDRAQADEVLQLREELETL
RRQKGAREAEVLLLQQRVAALATEKSRVQEKVTEKEVVKLQNDPQLEAEYQQLQEEHQRE
GKLREKQEEELSFLQAKLRRLEKERAMAEGKITVKEVLKVEKDAAAEREVSDLTRQYEDE
ATKARASQREKTELLRKIWALEEENAKVVVQEKVREIVRPDPKAESEVANLRLELVEQER
KYRAAEEQLKSYQGELEALRRRGPQVEVKEVTKEVIKYTTDPETEKELQRLREEIVDKTR
LIERCDLEIYQLKQEIQSLKDTKPQVQTREVVQEILQFQEDPQTRKEVESLRAKLSEEQK
KQVDLEGERVLQEEKIRGKEEELAQGRERVVRQEVVQYEEEPGLRAEVSAFTDSIDAELR
QIDKLRAELRRLQRRRGELERQLEELERERQARRAAEQEVQRLQQRLAALEQEEAKAGEK
VTRTQKVVLQQDPQQTREHALLQAQLEEERHRRQLLEGELEPLRRKLAALEKAEVKEKVV
FSESVQVEKGNTEQEIQKLKRSLEEESRSKRELDAEVAQLEAKLSELEFHNSKSSKELDF
LREENHKLQLERQNLQLETRRLQSEIEMAAAETRDLRNTTMVDSRTNLDSRLWSLERELD
DLKRLSKDKDLEIDELQRRLGSVSVKREQRENHLRRSIVVIDPDTGRELSPEEAHRAGLI
DWNMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEEALQSGRLTPAQYDRYVN
KDMSIQELAVLVSGQK
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgctcttcaggaagagaaacaaaggcaaatacagccccaaggtgcagacccgc
agcatctccaacaaggagctctcggagctgatcgaacagctgcagaaaaatgccgaccag
gtggagaggaacatcgtggacaccggggccaagatgcagagcgacttggctcggctgcag
gagggtcagcagcccgagcaccgggacgtggccctgcagaaggtgtcggactcggagaag
ctgctgtacgtgctggaggcggacgcggccattgccaagcacatgaagcacccgcagggg
gacatgattgctgaggacatccgtcagctgaaggagcgtgtggccaacctccgtgagaag
cacaagcagatctacaacctggcagcgaaggaggtggccccggaggtcaactgggcggcg
ctggtggaggagaagctggacaagctgaacggccagagctttgggacagacctgccgctg
gtggacagccaggtggagcagcacaacatcttccacaatgaggtcaaggccatcgggccc
cacctggccaaggacggggacaaggagcagaacagcgagctccaggccaagtaccagaag
ctgctggcggcgtcacaggctcggcagcagcacctgagctccctgcaggactacatgcag
cgctgcaccaatgagctctactggctggaccagcaggcccgggaccgcgtgcagtacgac
tggagcgaccgcaacctcgactaccccagccgccggcgccagtatgagaatttcatcaac
cggaacttggaggccaaagaagagaggattaacaagcttcacagcgagggagaccagctg
ctggccgccgagcaccccgggaggaacgccattgaggcgcacatggaggctgtgcacgca
gactggaaggagtacctgaaccttctcatctgtgaggagagccacctgaagttcatggag
gactaccaccagttccgcagagacgtgcaggacgctcaggagctgctgcgcaaggtggac
tcagacctgaaccagaaatacagccccgacttcaaggaccgctaccagatcgagctgctg
ctgcgggagctggacgaccaggagaaggctctggacaagtaccaggatgtggtgcggggg
ctgcagaagcgcgggcagcaggtggtgcccctcaagtaccgccgggagacgccgctcaag
cccatccctgtggaggcgctctgtgactttgagggtgaccagggccccatctcacggggc
tacagctacaccctgcagaagaacaacggggagagctgggagctcactgatgctgcaggg
gacaagctgagtgccccagctgtctgcttcatgatcccccccactgaccccgaggcgctg
gctctggctgacagcctggacagccagtaccggagtttgcggcagaaggcagcggggagc
cggcaggccctccaacagcggcacgaggtgctgaagacagagaaccctggagatgcctct
gacctgcagggacggcagctgttggccagcttggacaaggtggccagtgacttggaccga
caggagaaggccatcacagggatcctgcggccaccactggagcagggccgggctgtgcag
gacagtgcagagcgggccaaggatctcaagaacatcaccaacgagctgcggcggatcgag
cctgagaaggcgcagagcacagccgagtgtgcggccttcgtggaggccctcccgggcagc
ggcacggcgcccttgctgaaagcccgggtggaggacaccagccagaaatacgagcgcctt
gtgcagctactggacttggcccaggagaaagttgatgtggccaatcgcctggagaggagc
ctgcagcagggccgagagctgctggccacacacgagaaccggctggcccaggacgacacc
gtgcccgagagtggccgtgttctggacaacaagaggcaggagctggaggccatggcctcg
gaactacaggcccagaagtccctcctgggagaggtggagcggaacctgcaggaggccaaa
cggtgctcgagctcgctggccagctgcttccaggagcactgccctgacctggagcgccag
gaggccgaggcgcacaagctgagccagcgctttgacaacctgcgccagcaggtggagcac
agggcccagagcctgcagggagccaaggccgcctatgaggagtaccaccgtggctacgac
cgtgtgctccagttcttgtccagcacccccagttatgagccccaggagacagacagcctc
agccagatggagaccaagctcaagaaccaaaagaacctgctagatgagatagcaagtagg
gaagaggaagtacagaaggtctacgccaattcccagcagtaccagcaagctgtgaaggac
tacgagctagaagcagagaaactcaggtcgcttcttgacttggagaatggaagtaacagc
cacgtgagcaagagagccaggctgcagtctcccgctgccaaagtgaaggaggaggaagct
gctcttgctgccaagttcacagaagtccaggccatcaacaggcagaggctacagaatctg
gagtttgcactgaatctcctgagacagcagccagacacagaagtgacccgtgagaccctg
caagggaacaatctgggctccagtgtggaggagacatggaagatcaagaaggaactggac
gaggaggctgagcgaaggcagcagctggagaatgaggtcaagagcacccaggaggaaatc
cggaccctgcggaatcaggggcctcaggagtcgctggtgaggaaggaggtgctgaagaaa
gtgccagaccccgcactggaggagagcttccagcagatgcagcggaccctggcggaagag
cagcacaagaaccagctgctgcaggaggagctggaggcgctgcagctacggttgcgcgcc
ctggagcaggagaccagagatggggggcaggagtatgtggtcaaagaggtcttgcgcatc
gagcctgacagagcccaggcagacgaggtcctgcagctgcgggaggagctggagacactg
aggcggcagaagggtgcccgggaagcagaggtgcttctcttacagcagcgcgtggcagcc
ctggctactgaaaaaagccgggtacaggagaaggtcacagagaaggaggtggtgaagctg
cagaatgacccccagctggaggcggagtaccagcagctgcaggaggagcaccagcgggag
ggcaagctcagggagaagcaggaggaggagctgagcttcctacaggccaagctcaggagg
ctggagaaggagcgggccatggctgagggcaagataactgtcaaggaggtgctcaaagtg
gaaaaggatgcagctgcagagagggaggtcagtgacctcacccgccagtatgaggatgag
gccaccaaggcccgagccagccagcgggagaaaacagagctgcttcgaaagatatgggct
ttggaggaggagaatgccaaagtggtggtgcaggagaaagtccgcgagatcgtgcggcca
gaccccaaggcagagagcgaagtggccaatctccgcctggagctggtggagcaggagcgg
aagtacagggctgcggaggagcagctcaagagctaccagggtgagctggaggctctccgg
aggcggggtccgcaggtggaagtcaaagaggtgactaaagaagtcattaagtacaccact
gacccagagacagagaaggagctgcagcgactcagggaggagattgtggacaagaccagg
ctgattgagaggtgtgacttagaaatctaccagctgaagcaggagatccagtccctgaag
gacacaaagccgcaggtccagaccagagaggtggtccaggagatcctccagttccaggaa
gaccctcaaaccagaaaggaggtggaatctctgcgggcaaagctgtcagaagagcagaag
aagcaggtggacctggaaggggagcgagtgttacaagaagagaagatcaggggcaaggag
gaggagcttgcccaggggagggagagggtggtgcgccaggaggtggtacagtacgaggag
gagccaggcctgcgggcagaggtgagcgccttcactgacagcattgatgctgagctgcgc
cagatcgacaagctgcgcgctgagctgcggaggctgcagcggcggcgtggggagctagag
aggcagctggaagagctggagcgtgagcggcaggcgcgcagggcagctgagcaggaggtg
cagcgcctgcagcagcggctggctgcgctggagcaggaggaggccaaggctggtgagaag
gtgacccgcacacagaaggtggtgctgcagcaggacccacagcagaccagggagcacgcc
ctgctccaagcccagctggaggaagagcggcaccggagacagctgctggagggcgagctg
gagcccctgcgtagaaagctggctgccctcgagaaggcggaggtcaaagagaaggtcgtc
ttctctgagagtgtccaggtggagaagggcaacactgaacaggagatccagaagctcaag
aggagcctggaagaggagagcaggagcaagagggagctggacgccgaggtggctcagctg
gaagccaagctatcagagctggaattccacaactctaagtcgtccaaggagctggacttc
ctaagggaagagaaccacaaacttcagctagagcgacaaaacctgcagctagagacccga
aggctccaatcagaaattgaaatggcagcagcagaaacacgagacctgcggaacacgacc
atggtggactctaggaccaacctcgactccagactgtggtccttggagagagaactggat
gatctcaagaggctgtccaaggacaaagatctcgagattgatgagctgcagaggcgcctg
gggtccgtgtccgtcaagagggagcagagggaaaatcacctgcggcgctccatcgtggtg
attgaccccgacacaggccgtgagctgtcccctgaggaggcccacagggctgggctcatc
gactggaacatgtttgtgaaactcagaagccaggagtgcgactgggaggagatatcggta
aagggtcccaatggggagtcctcagtgatacacgataggaagtctggcaagaagttttct
attgaggaagccctgcagagcggcaggctgacccctgctcagtatgatcgctatgtcaac
aaggatatgtccattcaggagctggcggtgctggtgtctgggcagaagtag
DBGET
integrated database retrieval system
