Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958754
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Entry
101958754 CDS
T10664
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03040
Spliceosome
iti05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101958754
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101958754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101958754
03041 Spliceosome [BR:
iti03041
]
101958754
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101958754
mRNA cycle factors
Common to processing body (P body) and stress granule
101958754
Spliceosome [BR:
iti03041
]
Common components
Common spliceosomal components
hnRNP proteins
101958754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
101958754
NCBI-ProteinID:
XP_040124044
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
IEVKPLPGRPRPXSGSCRRPRGEEVQDPKEPEQLRKLFIGYLSFETTDDSLKEHFEKWGT
LTDCVVMIDLLTKHSRGFGFVTYSCVEEVDAAMCAWPHKVDGQVVEPKRAVSREDSVKPG
AHLTVKKTFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHNTV
DKTVVQKYHTIKGHNCQVKKALSKQEMQSAGSQRGRGGGSGNFMCRGGNFGGGGGNFGRG
GNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQG
GGYGGG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
attgaggtaaaaccgctgcccggtcgcccccgccccnactctggcagttgccgccgcccc
cggggggaggaggttcaggatccaaaggaaccagagcaattgaggaagctgtttattggt
tatctgagctttgaaactacagatgatagtttaaaagaacattttgagaaatggggcaca
ctcacagattgtgtggtaatgatagacctcctaacaaaacattccaggggctttggtttt
gtgacttactcttgtgttgaagaggtggatgcagcaatgtgtgcttggccacacaaggtt
gatgggcaagtagtggaaccaaaaagagctgtttctagagaggattctgtaaagcctggt
gcccatcttacagtgaagaaaacttttgttggtggtattaaagaagatacagaagaatat
aatttgagagattactttgaaaagtatggcaagattgaaaccatagaagttatggaagac
aggcagagtggaaaaaagagaggatttgcttttgtaacttttgatgatcataatacagtt
gacaaaactgttgttcagaaataccacactattaaggggcataattgtcaagtgaaaaag
gccctttctaaacaagagatgcagtctgctggatcacaaagaggtcgtggaggtggatct
ggcaactttatgtgtcgtggaggaaactttggaggtggtggaggtaactttggccgtggt
ggcaactttggtggaagaggaggctatggtggtggaggtggtggcagcagaggtagttac
ggaggaggtgatggtggatataatggatttggaggtgatggtggcaactatggtggtggt
cctggttatagtagtagaggaggttatggtggtggtggaccaggatatggaaaccaaggt
ggtggatatggtggtgga
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