Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958802
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Entry
101958802 CDS
T10664
Symbol
Rnf41
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101958802 (Rnf41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101958802 (Rnf41)
04121 Ubiquitin system [BR:
iti04121
]
101958802 (Rnf41)
03029 Mitochondrial biogenesis [BR:
iti03029
]
101958802 (Rnf41)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101958802 (Rnf41)
Membrane trafficking [BR:
iti04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
101958802 (Rnf41)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
101958802 (Rnf41)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101958802 (Rnf41)
Mitochondrial biogenesis [BR:
iti03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
101958802 (Rnf41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_6
zf-Nse
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
U-box
Sina_ZnF
zf-ANAPC11
Trimer_CC
zf-RING_10
Sos7
zf-TRAF
LXG
zf-RING_16
DUF641
NBAS_11th
Rootletin
SlyX
DUF4795
zf-TRAF_2
zf-CCCH_6
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
101958802
NCBI-ProteinID:
XP_005335683
UniProt:
I3M2E9
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVV
TVAHLRPVPRIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGC
GLEMPKDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAI
RSVNPNLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPA
SIVNELIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDM
VQEPGLVMIFAHGVEEI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggggtatgatgtaacccgtttccagggggatgttgacgaagatcttatctgccctatt
tgcagtggagtcttggaggagccagtacaggcacctcactgtgagcatgctttctgcaac
gcctgtatcacccagtggttctctcagcagcagacctgtccagtggaccgtagcgttgtg
acagttgcccacctgcgcccagtacctcggatcatgcggaacatgttgtcaaagctgcag
attgcctgtgacaacgctgtgtttggctgtagtgctgttgtccgtcttgacaacctcatg
tctcacctcagtgactgtgagcacaacccaaagcggcctgtgacctgtgaacagggctgc
ggcctggagatgcccaaagatgagctgccaaaccacaactgcattaagcacctgcgctcc
gtggtacagcagcagcagacacgtattgcagagctggagaagacgtcagctgaacataaa
caccagctggcggaacagaagcgagacatccagctgttaaaggcatacatgcgtgcaatc
cgcagtgtcaaccccaaccttcagaacctggaggagacgattgaatacaacgagatccta
gagtgggtgaactccctgcagccggctagagtgacccgctggggagggatgatctcgacc
ccagatgctgtgctccaggctgtaatcaagcgctccctggtggagagtggctgccctgcc
tctattgtcaacgagctgattgaaaatgcccacgaacgcagctggccccagggtctggcc
acactagagacaagacagatgaaccggcgctactatgagaactacgtggccaagcgcatc
cctggcaagcaggctgttgttgtgatggcctgtgaaaatcagcatatgggtgatgacatg
gtgcaggagccagggcttgtcatgatatttgctcatggcgtggaggagatatag
DBGET
integrated database retrieval system
