Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958806
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Entry
101958806 CDS
T10664
Symbol
Chfr
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR isoform X1
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101958806 (Chfr)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101958806 (Chfr)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101958806 (Chfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
FHA
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-CCHH
Yop-YscD_cpl
zf-rbx1
zf-RING_6
RXLR_WY
Glyco_hydro_92
Motif
Other DBs
NCBI-GeneID:
101958806
NCBI-ProteinID:
XP_013218820
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MEAPGGGEQQPPQQPWGRLLRLGAEESEPHVLLWKREWTIGRRRGCDLSFPSNKLVSGDH
CKILVDEKSGQATLEDTSTNGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY
ESLREKQGMTRESFEANKENVFHVTKESSGPGRGDDPQVPPSLSPATQACLEEPQPSTST
SDLFPRASTSSSEPTATGREHSFSSGPGGTGFSLKGCGPSVGSGELSSLTSALPDREGAQ
FSLLEPQNQEDLEPMKKKMKAGEALDPNLQQLVADQGRNTQPPREDVRATAMKPDKMEET
LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA
YLIQHPDKSRSEEDMRSMDARNKITQDMLQPKVKRSFSDEEGSSEDLLELSDVDSESSDI
SQPYIVCRQCPEYRRQAVQPLPCPAPDSEPGAQQALGGDAPSASASFTAAAQDYVCPLQG
SHAICTCCFQPMPDRRAEREQDPRVAPQQCSVCLQPFCHLYWGCTRTGCFGCLAPFCELN
LGDKCLDGVLNSNNYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRITGNTVL
CYCCGLRSFRELTYQYRQNIPASELPVAVASRPDCYWGRNCRTQVKAHHAMKFNHICEQT
RFKN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcccgggggaggcgagcagcagccgccgcagcagccctggggaaggctcctc
cgcctgggcgcagaggagagcgagccgcacgtcctgctgtggaaacgcgagtggaccatc
gggcggaggcgaggttgtgacctctcgttccctagcaataaactggtctctggagatcac
tgtaaaatacttgtggatgagaagtctggccaggcaacactggaagataccagtaccaat
ggaactgtgatcaacaagctgaaggtggttaagaagcagacttgtcctctgcagacgggg
gatgtcatctacttggtgtataggaaaaatgagcccgaacacaatgtggcatacctctat
gaatctctacgtgaaaagcaaggcatgacacgagaatcctttgaagccaataaagaaaat
gtgttccatgtgaccaaagagtcctcaggtccaggacggggtgacgacccccaggtccca
ccttcgttgtctcccgccactcaggcatgcttggaggaaccacagccatcaacatcgaca
tcagacctcttccccagggcctccacctcttcctcagagccgactgccacagggcgagag
cattccttcagctctggacctgggggtacaggcttctccctaaaaggatgtggtccatct
gtgggaagtggtgaactctccagccttacgtcagctctcccagacagagagggagcacag
ttttctttgctggaaccccagaaccaggaggatctggagcccatgaaaaagaaaatgaaa
gcaggtgaggcacttgacccgaacctgcagcagttggttgcagaccagggtagaaatacc
cagcctccccgtgaggacgtcagagctactgccatgaagccagacaagatggaggagacg
ctcacatgcatcatctgccaggacctgctgcacgactgcgtgagcttgcagccctgcatg
cacacgttctgtgcagcttgctactctggctggatggagcgctcctccctgtgccccacc
tgccgctgtccagtggagcggatctgtaagaaccacatcctcaacaaccttgtggaagca
tacctcatccagcacccagacaagagtcgcagtgaagaagatatgagaagtatggatgcc
aggaataaaattacccaagacatgctgcagcccaaagtcaagaggtctttttctgatgaa
gaggggagttcagaggacctgctggagctgtcagatgttgacagcgagtcctcagacatc
agtcagccatacatcgtgtgcagacagtgccccgagtacagaaggcaagcggtgcagccc
cttccctgcccagcacccgacagtgagccgggggcccagcaggcccttggtggggatgca
ccatcagcgtctgccagcttcacggcagcagcccaggattatgtgtgccctctacaagga
agccacgccatctgcacctgctgcttccagcccatgcctgatcggagagcggagcgggaa
caggacccacgtgtggcccctcagcaatgttcagtctgcttacagcccttctgtcacctg
tactggggctgtacccgcactggttgctttggctgccttgcccctttctgtgagctcaac
ctgggagacaagtgtctggatggagtgctgaacagcaataactacgagtcagacatcttg
aagaattacctggcaaccaggggtctgacgtggaaaaacatgttgacagagagtcttgtg
gctcttcagcggggagtgtttttactgtctgattacagaatcactgggaacactgtactg
tgttactgctgtggcctgcgtagcttccgggagctgacctatcagtatcggcagaacatt
cctgcttctgagttaccagtggctgtggcatcccgtcctgattgttactggggccgtaac
tgccgcactcaggtgaaagcccaccacgccatgaaattcaatcacatctgtgaacaaacc
aggttcaagaactga
DBGET
integrated database retrieval system
