Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958902
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Entry
101958902 CDS
T10664
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101958902 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101958902 (Vps35)
Membrane trafficking [BR:
iti04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
101958902 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
CENP-O
Imm5
FerA
Motif
Other DBs
NCBI-GeneID:
101958902
NCBI-ProteinID:
XP_005318196
UniProt:
I3M2Y3
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPIEDPD
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcacctcaagatgagcaggagaagctcttggatgaagccata
caggctgtgaaggttcagtccttccagatgaagagatgcctggacaaaaacaagcttatg
gatgctctgaaacatgcttctaatatgcttggtgaactccggacttctatgttatcacca
aagagctactatgaactttatatggctatttctgatgaactgcattatttggaagtctac
ctaacagatgaatttgctaaaggaagaaaagtggcagatctttatgagcttgtacaatat
gctgggaacattatcccaagactttatttgttgatcacagttggagttgtatatgtcaaa
tcatttcctcagtctaggaaagatattttgaaagatttggtagaaatgtgccgtggtgtg
cagcatccattaaggggtttatttcttcgaaattatcttcttcagtgtaccagaaacatt
ttacctgatgaaggagagccaacagatgaagaaacaacaggtgatatcagtgattctatg
gattttgtactactcaactttgcagaaatgaacaagctctgggtgcgaatgcagcatcag
ggacatagccgagatagagaaaaaagagaacgagaaagacaagaactgagaattttagtg
ggaacaaatttagtgcgcctcagccagttggaaggtgtaaatgtggaacgttacaaacag
attgtattgactggtatattagaacaagttgtgaattgtagggatgctttggctcaagaa
tatctcatggaatgtattattcaggtttttcctgatgaattccacctccagactttgaat
ccttttcttcgggcttgtgctgagttacaccaaaatgtaaacgtgaaaaacataatcatt
gctttgattgatagattagctttatttgctcatcgggaagatggacctggaatcccagca
gatattaaactttttgacatattttcacagcaggtggctacagtgatacagtctagacaa
gacatgccttcggaggatgttgtatctttacaagtctctctcattaatcttgccatgaaa
tgttaccctgatcgggtggattatgttgataaagttctagaaacaacagtggagatattt
aataagcttaaccttgaacatattgctaccagtagtgcagtttcaaaggaactcaccaga
cttttgaagatacctgttgatacttacaacaatattttaacagtcttaaaattaaaacat
ttccacccactttttgagtactttgactacgaatccagaaagagcatgagttgttatgtg
cttagtaatgttctggattataacacagaaattgtctctcaagaccaagtggattccata
atgaatttggtatccacattgattcaagatcaaccagaccaacctatagaagaccctgat
ccagaagactttgctgatgagcagagccttgtgggccgatttattcatcttctgaggtct
gaggaccctgatcagcagtacttgattttaaacacagcacggaaacattttggagctggg
ggaaatcaacggattcgtttcacactaccacctttggtatttgcagcttaccagttggct
tttcgatacaaagagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatt
ttttcatttgctcaccagactatcagtgctttgatcaaagcagaactggcagagttaccc
ttaagacttttccttcaaggagctctagctgctggagaaattggttttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctctatatgaggatgaaattagtgat
tccaaagcacagctggctgctatcaccttgatcattggcacttttgagaggatgaagtgc
ttcagtgaagagaatcatgaacccttaaggactcagtgtgcacttgctgcatccaaactt
ctgaaaaaaccagatcagggccgagctgtgagcacctgtgcacatctcttctggtctggc
agaaacacagacaaaaatggggaggagcttcatggaggcaagagggtaatggagtgccta
aagaaagctctaaaaatagcaaatcaatgcatggacccctctctacaagtgcagcttttt
atagaaattctgaacagatatatctatttttatgaaaaggaaaatgatgcggtaacaatt
caggttttgaaccagcttatccagaagattcgagaagacctcccaaatcttgagtccagt
gaagaaacagagcagattaacaaacattttcataatacattggagcatttgcgtttgagg
cgggaatcaccagagtccgaggggccaatttatgaaggtctcatcctttaa
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