Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958991
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Entry
101958991 CDS
T10664
Symbol
Adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04611
Platelet activation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101958991 (Adamts13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
iti01002
]
101958991 (Adamts13)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
101958991 (Adamts13)
Peptidases and inhibitors [BR:
iti01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
101958991 (Adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADAMTS_CR_3
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Adt-1
TSP1_spondin
Reprolysin_5
Reprolysin_4
Peptidase_M10
TSP1_CCN
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
101958991
NCBI-ProteinID:
XP_005337060
LinkDB
All DBs
Position
Unknown
AA seq
1395 aa
AA seq
DB search
MSLLHPWVRCQPLSMAGVRGVLAGAFFVLGCLALSVFQQNFLEALEPKDLASYFGPSATF
EGRPSPRLQRRRRAVGGTLHLELLVAVGPDVHQAHQEDTERYILTNLNIGSELLRDPSLG
AQFRVHLVKLIILTETKDAPNITANITSSLLNVCEWSQTINPVDVTDPGHADLVLYITRF
DLELPDGNRQVRGVTQLGGVCSPSWSCLITEDTGFDLGVTIAHEIGHSFGLDHDGAPGSE
CEPSGHVMASDGVVPVHGGLEWSTCSRRQLQHLLSLGQVPCAWDPPQSPSGSKDHLLDVQ
PGLYYGADEQCRVAFGPGAFACTFTREGLDMCQALSCHTDPRDQGSCSRRLIPLLDGTEC
GTEKWCSKGHCRSLAELTPVAAVHGQWSSWGPRSPCSRSCGGGVATRRRRCSNPRPAFGG
RACVGADLQAEMCNTQACEKTQLEFMSEQCAQTDGQPLHLSPGIPSFYHWGAAAQYSQGD
ALCRHMCRAIGKSFIVRRGDHFLDGTRCVPSGPREDGALSLCVSGSCRTFGCDGRMDSRL
VWDACHVCGGDNSTCSPQKGSFTAGRAQEYATFLTVTPNMTNVHIVNHRPLFTHLAMRIR
GRYIVAGNGSISPSTTYPSLLEDSRVEYRVTLTEDQLPYLEEIRIWGPAQEDMEIQVYRR
HSEEHGQLTRTNVTFTYFQPRQQAAWAWAPMRGPCSVSCGAGLRWVSYGCLDQARGQWVE
TAQCQESPQPPSWPESCNPAPCPPYWLAGDFGPCSASCGGGLRERLLSCVEAQGGLLRTL
SPAQCRAVAQQPAVEVETCNSQPCPARWKVSDTGPCTVACGTSVAFWNITPVQGSDGLEA
PATTGPCCMDERSPALKPCTRMACPPGWSQLDTTSLGEEAPLPLGSARLEAQATHMWTPL
TGPCSVSCGRGLMELRFLCMDSALGTPVQEELCGVAGKPGSRQEVCWAGPCPARWEARAL
APCPVTCGGGQVPLAVRCIRLDHGRPVPLPHSKCWPVPRPGPFEDCSPEPCPARWKVTSL
GPCSASCGPGTAVRTVACMQLEGGQDTEVDEVSCAALVRPQASVPCLLTDCTYLWHVGTW
TECSVSCGDGIQRRHATCHGAQAPVPASFCQHSPKPATVRSCQAGPCEGRGTLHSVPHKE
ATDPSQTTAAVAGASLEWPQESLVESSACGRQHLEPTGTIDMRSPGQADCVVAIGRPLGE
VVTLQVLESTLNCSAGEKLLLWGRFMWRKLCGKLSGLTFSSRTNILVAKLHLVWPGSGVL
LGYRSQPAPGTFYRECDIQLFGPQGEIVSPLLSSAMTGAGGCRVFISVAPQARIAIHALV
THMGPRTKGTNASYVSIRDAHSLRTTTFHGQQALYWESEGSEAEVEFSQGFLEAHASLQG
QYWTLNPRMPEEPGA
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcttcacccctgggtgagatgccagcctctgtccatggctggtgtcagggga
gtccttgctggtgccttctttgtcctgggctgcttggcactctccgttttccagcagaac
tttcttgaggccctggagcccaaggacctggcttcttactttggccccagtgctaccttt
gaaggccgtccttcccctcgtctccagagacggagacgggctgtagggggcaccctgcac
ctggaactgctggtggctgtgggccccgatgtccaccaggctcaccaggaggatacagaa
cgctacatactcaccaacctcaacattgggtcagaactgctgagggacccgtccctgggg
gctcagttccgtgtgcacctggtgaagctgatcattctcacagagaccaaggatgctccc
aacatcacagccaacatcacctcgtccctgttgaacgtttgtgagtggagccagaccatc
aaccctgtggatgtcacagaccctgggcatgctgacctggtcctctacatcaccaggttc
gacttggagttgcctgatggcaaccgacaagttcggggggtcacccagctggggggtgtc
tgttccccctcctggagctgcctcatcacagaggacactggcttcgatctgggggtcaca
attgcccatgagattgggcacagctttggccttgaccatgatggtgcaccaggcagtgaa
tgtgagcccagtggccatgtgatggcatctgatggtgtggtgccagtgcatgggggcctg
gagtggtccacgtgcagccgccggcagctgcagcacctgcttagcttgggacaggtgccc
tgcgcgtgggacccaccacagtcaccatctggatccaaggaccacctgctggatgtacag
ccaggcctctactatggcgcagatgagcagtgccgggtggcctttggcccaggggctttt
gcctgcacctttaccagagagggcctggacatgtgccaggctctctcctgccacacagac
cctcgggaccaaggtagctgcagccgccgcctcattcccctgctcgatgggacagaatgt
ggtacggagaagtggtgttccaagggtcactgccgctcattggcagagctgacccccgtg
gcagcagtgcatggacagtggtccagctggggtccccgcagcccttgctcccgctcctgt
ggaggaggtgtggccaccaggaggcggcgctgcagtaaccccagacctgcctttggaggg
cgtgcgtgtgtcggggctgacctccaggccgagatgtgcaacacccaggcctgcgagaag
actcagctggagttcatgtcggagcagtgtgcccagactgatggccagccgctgcacctc
tccccaggcatcccctccttctaccactggggtgccgcagcacagtacagtcaaggggat
gctctgtgcagacacatgtgccgggccattggcaagagcttcattgtgaggcgtggagac
catttcctggatgggactcggtgtgtgccgagcggccctcgggaggacggggccctgagc
ctgtgtgtgtctggcagctgcaggacatttggctgcgatggcaggatggactcccggctg
gtgtgggatgcatgccatgtgtgtggaggggacaatagcacgtgcagcccacaaaagggc
tccttcacggctggtagagcccaagagtatgccaccttcctgacggtcacacccaacatg
accaatgtgcacatagtcaaccacaggccactcttcacgcacctggccatgaggatccga
gggcgctacattgtggctgggaatggcagcatctcccccagcaccacctacccctcccta
ctggaggacagccgtgtggagtacagagtaaccctcacagaggaccagctgccctacctg
gaggaaatccgcatctggggaccagcccaggaagacatggagattcaggtgtatcggcgg
cacagcgaggagcacggccagctcacccgcaccaacgtcactttcacctacttccagcct
aggcagcaggcagcctgggcatgggcccccatgcgcgggccctgctcggtgagctgtggg
gcaggactgcgctgggtgtcctatggctgcctggaccaagcccgggggcagtgggtggag
actgcccagtgccaagaaagcccccagcctccctcatggccagagtcctgcaaccctgca
ccgtgccccccatactggctggctggagacttcggcccatgcagtgcctcctgtggggga
ggcctccgtgagcggctgctgagctgtgtggaggcacaggggggcctcctgaggacgttg
tccccggcccagtgcagagcggtggcccagcagccagcagtggaggtggaaacctgcaac
tcccagccctgcccagccaggtggaaggtatcagacactggcccctgcacagtagcctgt
ggaacaagtgtggccttctggaatataacacctgtgcaggggtcagatggcctggaggca
ccagcaactacagggccctgctgcatggatgagaggtcacctgctctcaagccctgtacc
aggatggcatgtcctccaggctggagtcagctggacaccacgtctcttggggaagaggcc
cccttgccactgggcagtgccaggctagaggctcaggccacacacatgtggactcctctg
acagggccatgctctgtctcctgtgggcgaggtctgatggagctgcgttttctgtgcatg
gactctgccctggggacacctgtccaggaagagctgtgtggtgtggctggcaagcctggg
agccggcaggaagtctgctgggctggcccgtgccccgctcggtgggaggcccgagccttg
gcaccgtgcccagtgacttgtggagggggtcaggtgcccctggctgtgcgctgtataagg
ttggaccacggccgccctgtccctttgccccactccaagtgctggccagtgccccgacct
ggcccctttgaggactgcagcccagaaccctgtccagccaggtggaaggtcacatccctt
ggtccttgctcagccagttgtggccctggcactgctgtccgcacagtggcctgcatgcaa
cttgaaggaggccaggacactgaggtggatgaggtgtcctgtgcagctctggtgcggcca
caagccagtgtcccctgcctcctcactgactgtacctacctgtggcacgttggcacctgg
acagagtgctctgtctcctgtggggatggcatccagcgccggcacgccacctgccatgga
gcccaggcacctgtgccagccagcttctgccagcactcacccaagccagcaacagtgcgc
agctgccaagctgggccttgtgaggggcgggggaccctccactcagtgccccacaaagaa
gccactgaccccagccagaccacagctgctgttgctggtgcttctctggagtggccccag
gaaagcctggtggagtccagtgcctgtggcaggcagcacctggagcccacaggaaccatt
gacatgcgaagcccagggcaggcggactgtgtggtggccatcgggcggcccctgggtgag
gtggtaacactccaagtccttgagagcaccctcaactgcagtgcaggagagaagttgctg
ctttggggccggttcatgtggaggaagttgtgtgggaagctgtctggcctgactttcagc
tccaggaccaacattctggtggctaagctacaccttgtgtggcccggaagtggagtgctg
ctggggtacaggagccagcctgcccctggaactttctacagagaatgtgacatacagctc
tttggaccccagggtgaaatcgtgagccccctactgagttcagcgatgacgggtgcaggg
ggctgccgggtcttcatcagtgtggctccacaagcccggattgccatccatgctctggtc
acccacatgggccctagaactaagggaaccaacgccagctatgtctcaatccgggatgcc
cacagcctgaggaccacaacattccatgggcagcaggcgctctactgggagtcagagggc
agtgaggctgaggtggagtttagccagggcttcctggaggcacatgccagcctgcagggt
cagtactggaccctcaatcccagaatgccagaagagcctggagcatag
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integrated database retrieval system
