KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101959048
Entry
101959048         CDS       T10664                                 
Symbol
Aptx
Name
(RefSeq) aprataxin isoform X2
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101959048 (Aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:iti03400]
    101959048 (Aptx)
Enzymes [BR:iti01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     101959048 (Aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     101959048 (Aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     101959048 (Aptx)
DNA repair and recombination proteins [BR:iti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101959048 (Aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     101959048 (Aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N zf-C2H2_4
Other DBs
NCBI-GeneID: 101959048
NCBI-ProteinID: XP_005326237
LinkDB
Position
Unknown
AA seq 341 aa
MRVCWLVRQDILHQRIKLPHLEAVMIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQV
GVNPTSIDSVIIGKDQEMKLHPGQVLYMVNELYPYIIEFEEEAKNPGLETHRKRKRSGNG
NSVERDAVQEAEPGTGVEPGSSPRPCSMAPQKEKDASNKKDSLGHWSQGLKISMQDPKMQ
VYKDEQVVVIKDKYPKARHHWLVLPWASISSLKDVTREHFELLKHMHTVGEKVIADFAGS
SKLRFRMGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESEAVIKMVQESG
RVTVRDGMSELLKLPLRCHECQQLLPTIPQLKEHLRRHWTK
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgcgggtgtgctggttggtgagacaagacatcttgcaccagcgaatcaaacttccacat
ttggaagcagttatgattgggcgtggcccagagaccaagatcactgataagaaatgttct
cgacagcaagtacagttgaaagcagagtgtaacaagggatatgtcaaggtaaagcaggtt
ggagtcaatcccaccagcattgactcagtcataattggaaaggaccaagagatgaagctg
caccctggccaggttctctacatggtgaatgaactttatccatatattatagagtttgag
gaagaggcaaagaaccctggcctagaaacacacaggaagagaaagaggtcaggcaatggt
aattctgtagaaagggatgctgtccaggaagctgagcctgggacaggggtggaacctggg
agcagccccagaccatgctctatggcccctcaaaaggagaaagatgcatctaacaaaaag
gactcactgggccattggagtcaaggcttgaaaatttctatgcaggaccccaaaatgcag
gtttacaaagatgagcaggtagtggtgattaaggataaatatcctaaggctcgtcatcac
tggctggtcttaccatgggcctccatttccagtctgaaggatgtgactagggaacacttt
gaactcctcaagcacatgcacactgttggggaaaaggtgattgcagattttgctggatct
agcaaactccgcttcagaatgggctaccatgccattcccagcatgagccatgtacaccta
catgtgatcagccaagattttgattctccttgccttaaaaacaaaaaacattggaattct
ttcaatacagaatactttctagaatcagaagctgtgatcaagatggtgcaagagtctggc
agagtgactgttcgagatgggatgtctgagctcttgaaactgccccttcgttgtcatgag
tgccagcagctactgcctaccattcctcagttgaaagagcatctcaggaggcactggaca
aagtga

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