Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101959289
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Entry
101959289 CDS
T10664
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X2
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03013
Nucleocytoplasmic transport
iti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101959289
03015 mRNA surveillance pathway
101959289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101959289
Enzymes [BR:
iti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101959289
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101959289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101959289
NCBI-ProteinID:
XP_005318470
UniProt:
A0A287CYD7
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSNLHLKEEKIKPDVNGAVVKTNANAEKTDEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHIEPANKYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLRFIDPRRIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggcggtggatgagcaggaagcggcggccgagtcgttg
agcaacttgcatcttaaggaagagaaaatcaaaccagatgtcaatggtgctgttgtcaag
accaatgctaatgcagagaagacagatgaagaagagaaagaggacagagctgcccagtct
ttactcaacaagctgatccgaagcaaccttgtagataacactaaccaagtggaagtcctg
cagcgagatccgaactccccactctactcagtgaagtcttttgaagagcttcgactgaaa
ccacagcttctccaaggagtctatgccatgggtttcaaccgtccttccaaaatccaagag
aatgcattgcctttgatgcttgctgaacccccacagaacttaattgcccagtctcagtct
ggtactggtaaaacagctgcctttgtgttggctatgctcagccacatagaacctgcaaac
aaatatccccagtgtctgtgcctctcccccacatatgagctcgcccttcaaacaggaaaa
gtgattgaacagatgggcaaattttaccctgaattgaagctagcttatgctgttcgaggc
aataaattggaaagaggtcagaagatcagtgagcagattgtcattggtaccccagggacc
gtcctggactggtgctccaagctcaggttcattgaccccagaaggatcaaggtgtttgtt
ctggatgaggctgacgtgatgatagccactcagggccaccaagatcagagcatccgtatc
cagaggatgctacccaagaactgccagatgttgcttttctctgccacctttgaagactct
gtgtggaagtttgcccagaaagtggtcccagaccccaacattatcaaactgaagcgtgaa
gaggagacgttggacaccatcaagcagtactatgtcctgtgcaataacagagatgagaag
ttccaggccttgtgcaacttgtatggggccatcaccatcgcacaagccatgatcttctgc
catacccgcaaaacagctagttggttggcagcagagctctcaaaagaaggccaccaggtg
gctctgctgagtggagaaatgatggtggagcagagggctgctgtgattgagcgcttccga
gagggcaaagagaaggttctggtgaccaccaatgtgtgtgctcgtggcatcgatgttgaa
caagtgtctgtggtcatcaacttcgatcttcctgtggacaaggacgggaacccagataac
gagacctacctgcaccggattgggcgcactggccgctttggcaagagaggcctggccgtg
aacatggttgacagcaagcacagcatgaacattctgaacagaatccaggaacattttaat
aagaagatagaaagattggacacagatgatttggacgagattgagaaaatagccaactga
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integrated database retrieval system
