Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101959354
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Entry
101959354 CDS
T10664
Symbol
Dtx4
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4 isoform X2
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101959354 (Dtx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101959354 (Dtx4)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101959354 (Dtx4)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101959354 (Dtx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_2
WWE_5
zf-RING_5
zf_RING_Vps8
zf-ANAPC11
PHD_NSD
zf-RING_Vps41
PHD
zf-RING_16
zf-UDP
Motif
Other DBs
NCBI-GeneID:
101959354
NCBI-ProteinID:
XP_005331612
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MNQFRQDTGTLRPVRRHYYDPSSAPGKGVVWEWENDNGSWTPYDMEVGITIQHAYEKQHP
WIDLTSIGFSYVIDFSTMGQINRQTQRQRRVRRRLDLIYPMVTGTLPKTQSWPASPGTAT
SPPAPPCSCPQCVLVMSVKAAVVNGSHGPLQPTATRKNVPPSGMVKLPPPPGPGAKPLDS
TGTIRGPVKTAPSQTIRRQASGTPAGATAGSPASPPGANSKTGRVALATLNRTNLQRLAI
AQSRVLIASGVPTVPVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVS
KSEIKSIPGVSNTSRKTTKKQARKGKTPEEVLKKYLQKVRHPPEEDCTICMERLTAPSGY
KGPQPTVKPDLVGKLSRCGHIYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGK
MEYHLIPHSLPGHPDCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRK
VLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLA
ELAAQGISEDSTAQEKD
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttccgccaagacacggggaccctccgcccagttcgccgccactactacgac
ccatcctcagcccccgggaagggcgtggtgtgggagtgggagaatgacaacggttcctgg
acgccctatgacatggaggtgggcatcaccatccagcacgcctacgagaagcagcacccc
tggatcgacctcacgtccatcggcttcagctacgtcattgacttcagcaccatgggccag
atcaaccggcagacccagcgccagcgccgggtccgccgacgtctcgacctcatctaccct
atggtcaccggcaccctgccgaagactcagtcctggccggccagccctgggacggccacc
tcgcccccggcaccaccctgctcctgtccgcagtgtgtcttggtgatgagcgtcaaggcg
gccgtggtcaacgggagccacgggcccctgcagcccacagccacccgcaagaatgtgccc
ccctctggaatggtcaagctgcccccaccaccaggccctggggccaagccactggacagt
accggcaccattcgaggcccagtgaagaccgccccatcgcagacgatccggcgacaagcc
tctggcacaccagctggggcaactgcaggctctcctgccagccccccaggagccaacagc
aagaccgggagggtggccctggctaccttgaatcgaaccaacctgcagcgactggccatc
gcccagtcccgggtgctgatcgcctccggggtccccactgtcccagtgaaaaacttaaat
ggttccagtcccgtcaaccctgccttggctggaatcacagggatcctcatgagcgcagct
ggattgcctgtatgtctcaccaggccgccaaagctggtcctgcacccacctcccgtcagc
aagagcgaaatcaagtccattcctggggtttccaacacgagccgcaagaccaccaaaaaa
caagccaggaaaggtaaaacgccagaggaagtgctgaagaagtatctgcagaaggtccgg
cacccgccagaggaggactgcaccatctgcatggagcgcctcaccgctccctcgggctac
aagggcccacagcccacggtcaagcctgacctggtaggaaagctgtccaggtgtggccac
atctaccacatctactgcctggtcgccatgtacaacaatgggaacaaggacgggagtctg
cagtgcccaacctgtaagaccatttatggggtgaagacaggcacccagcctccagggaag
atggagtaccacctcatcccccactccttgcctggccacccagactgcaaaaccatccgg
attatctacagcatccccccgggcattcaggggccagaacacccaaaccctggcaagagt
ttcagcgcccgtggcttcccacgacactgttaccttccagacagcgagaaagggagaaaa
gttctcaagttgctcctcgtggcctgggatcgccgtctcatctttgccatcggtacctcc
agcaccacgggcgagtctgacacggtcatctggaatgaggtgcaccacaagacagagttt
ggctctaatctcaccggccatggctacccggatgccaattacctggataacgtgctggcc
gaactggctgcccagggcatctctgaggacagcactgcccaggagaaagactga
DBGET
integrated database retrieval system
