Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101959400
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Entry
101959400 CDS
T10664
Symbol
Trpv2
Name
(RefSeq) transient receptor potential cation channel subfamily V member 2 isoform X1
KO
K04971
transient receptor potential cation channel subfamily V member 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04621
NOD-like receptor signaling pathway
iti04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101959400 (Trpv2)
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
101959400 (Trpv2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101959400 (Trpv2)
Ion channels [BR:
iti04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101959400 (Trpv2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
101959400
NCBI-ProteinID:
XP_005340871
UniProt:
I3MIS6
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MTSPSSPPAFRLETSDQNQEDGAEVDRGKHGPPPMESPFQGEDRNFSPQIKVNLNYRKGL
GPSQPDPNRFDRDRLFSVVTRGAPEDLAGLQEYLNRTSKYLTDSEYTEGSTGKTCLMKAV
LNLQDGVNACILPLLQIDRDSGNPQPLVNAQCTDEYYRGHSALHIAIEKRSLQCVKLLVE
NGADVHARACGHFFQKRQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQRASLQAADSL
GNTALHALVMIADNSKENSALVIHMYDDLLQAGARLCPTVQLEDICNLEGLTPLKLAAKE
GKIEIFRHILQREFSGLCQPLSRKFTEWCYGPVRVSLYDLASVDSWEENSVLEIIAFHCK
SPHRHRMVVLEPLNKLLQAKWDMLIPRFFFNFLSYLIYMLVFTAVAYHQPALEKQAFLPL
KATGGNSMLLLGHILILLGGIYLLLGQLWYFWRRRLFIWISFVDSYFEILFLLQALLTVL
SQVLCFMAIEWYLPLLVSSLVLGWLNLLYYTRGFQHTGIYSVMIQKVILRDLLRFLLVYL
VFLFGFAVALVSLSREARDSGTPAGNNATEVAQPGTEQENEATPYRGILDASLELFKFTI
GMGELAFQEQLRFRGVVLLLLLAYVLLTYVLLLNMLIALMSETVNNVATDSWSIWKLQKA
ICVLEMENGYWWCRRKKQRAGVLLKVGTRPDGTPDERWCFRVEEVNWASWEQTLSTVREE
PSEGNAPGSMKNPILASQPGEDHASKEDHLPLQVLQSH
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccctccagccctccagctttcaggctagagacatcagatcaaaaccaagaa
gatggtgctgaggtggacagaggaaagcatgggcctccccccatggagtcaccgttccag
ggcgaggaccggaacttctcccctcagataaaagtgaacctcaactatcgaaagggactg
ggtcctagccagccagacccaaaccgctttgaccgtgatcgactcttcagcgtggtcacc
cgaggtgcccctgaagacctggctgggctacaagaatacctgaaccggaccagcaagtac
ctcactgactcggaatacacagagggctccacagggaagacatgtctgatgaaggcggtg
ctgaaccttcaggatggagtcaatgcctgcatccttccattgttgcaaatcgatagagac
tctggcaatccgcagcccctggttaatgcccagtgcacggatgagtactaccgaggccac
agtgccctgcatattgccattgagaagaggagcctgcaatgtgtgaagctcctggtggag
aatggggcagatgtgcatgcccgtgcctgtggccacttcttccagaagagacagggaact
tgcttctattttggtgagctgcctctatctctggctgcttgtactaagcaatgggatgtg
gtgacttatctcctggagaatccgcaccagcgtgctagcctgcaggccgctgactccttg
gggaacacagccctccatgccctggtgatgattgcagacaactctaaagagaacagcgca
ctggtgatccacatgtatgatgatcttcttcaagcaggagcccgcctctgccccactgtg
cagcttgaagacatttgcaacttggagggcctcacacccttgaagttggctgccaaggag
ggtaaaattgagattttcaggcacatcctgcaacgggagttctcaggactgtgccagccc
ctttctcgaaagttcaccgagtggtgctatgggcctgttcgggtgtcactgtatgacctg
gcctctgtggacagctgggaggagaactcagtgctggagatcattgcctttcactgcaaa
agcccgcaccgacaccgcatggtggttttggaaccactgaacaaactgctgcaggcgaaa
tgggatatgctcatcccccggttctttttcaacttcctgagttacctgatctacatgttg
gtcttcactgctgtggcttaccaccagcctgctctggagaagcaggccttcctcccgctg
aaagcgacaggtggaaactcgatgctgcttctgggccacatcttgatcctgcttggggga
atctacctcctcttgggccagctgtggtacttctggcgccgacgactgttcatctggatc
tcctttgtggacagttactttgaaattctctttctgctccaggctctgctcacggtactg
tcccaggtgctgtgtttcatggccatcgagtggtacctgcccctacttgtgtcctcgctg
gttctgggctggctgaacctgctttactatacacgtggcttccagcacacaggcatctac
agcgtcatgatccagaaggtcatcctgagggacctactccgcttccttctggtctacttg
gtcttccttttcggctttgctgtagccctggtgagcctaagccgcgaggcccgggactct
ggaacccctgcaggaaacaatgccaccgaggtagctcagcctgggacagagcaggagaat
gaggcaacaccatacaggggcatcctggatgcctccttggagctcttcaagttcaccatt
ggcatgggcgagctggctttccaggaacagctgcgcttccgtggggtggtcctgctgctg
ctgctggcctacgtgctgctcacctacgtccttcttctcaacatgctcattgctctcatg
agcgagaccgtcaacaacgttgccacggatagctggagcatttggaagctgcagaaagcc
atctgtgtcttggagatggagaatggctactggtggtgcagaaggaagaagcaacgggca
ggtgtgctactgaaagttggcaccaggccagatggcacccctgatgaacgctggtgcttc
agggtggaggaagtgaactgggcttcgtgggagcagacactctccacagtgcgtgaggaa
ccatcggaaggcaatgcccctggttccatgaagaaccccattctggcttcccaacctggg
gaggatcatgcctcaaaggaagaccatcttcctcttcaggtgcttcagtctcactga
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integrated database retrieval system
