Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101959551
Help
Entry
101959551 CDS
T10664
Symbol
Ncam1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X19
KO
K06491
neural cell adhesion molecule
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
iti04514
Cell adhesion molecules
iti05020
Prion disease
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
101959551 (Ncam1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101959551 (Ncam1)
09160 Human Diseases
09164 Neurodegenerative disease
05020 Prion disease
101959551 (Ncam1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101959551 (Ncam1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101959551 (Ncam1)
04090 CD molecules [BR:
iti04090
]
101959551 (Ncam1)
00536 Glycosaminoglycan binding proteins [BR:
iti00536
]
101959551 (Ncam1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
101959551 (Ncam1)
04091 Lectins [BR:
iti04091
]
101959551 (Ncam1)
Membrane trafficking [BR:
iti04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
101959551 (Ncam1)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
NCAM1/2
101959551 (Ncam1)
CD molecules [BR:
iti04090
]
Proteins
101959551 (Ncam1)
Glycosaminoglycan binding proteins [BR:
iti00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
101959551 (Ncam1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
Others
101959551 (Ncam1)
Lectins [BR:
iti04091
]
I-type lectins (Siglecs)
101959551 (Ncam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_DSCAM-DSCAML_C
C2-set_2
C1-set
Ig_5
Ig_6
Ig_C17orf99
C2-set_3
V-set_CD47
Ig_VEGFR-1-like_5th
Adeno_E3_CR1
Pur_ac_phosph_N
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
101959551
NCBI-ProteinID:
XP_005334268
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MLQTKDLIWTLFFLGTAVSLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGE
KLSPNQQRISVVWNDDSSSTLTIYNANIDDAGIYKCVVTGEDGSESEATVNVKIFQKLMF
KNAPTPQEFREGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK
KTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQTIVNATANLGQSVTLVCDAEGF
PEPTMSWTKDGEQIENEEDDEKYIFSDDSSELTIRKVDKNDEAEYVCIAENKAGEQDASI
HLKVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKTLDGHMV
VRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYSPKLQGPVAVYTWEGN
QVNITCEVFAYPSATISWFRDGQLLPSSNFSNIKIYNTPSASYLEVTPDSENDFGNYNCT
AVNRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAL
GEEAWHVKWYDAKEANMEGIVTIVGLKPETTYEVRLAALNGKGLGEISAASGFKTQPVRE
PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVKYRAISSEWKPEIRLPSGSDHVML
KSLDWNAEYEVYVVAENQQGKSKAAHFVFKTSAQPTAIPANGSPTSGLSTGAIVGILIVI
FVLLLVVVDITCYFLNKCGLLMCIAVNLCGKAGPGAKGKDMEEGKAAFSKDESKEPIVEV
RTEEERTPNHDGGKHTEPNETTPLTEPELPADTTATVEDMLPSVTTVTTNSDTITETFAT
AQNSPTSETTTLTSSIAPPATAAPDSNSVPAGQATPSKGPSVAASSPPPASAPKVAPLVD
LSDTPTSAPASNLSSSVLANQGAVLSPSTPASVGEASKAPAASKASPLAAAAAPATEAPQ
AKQEAPSTKGPDPEPTQPGAAKSPSEAATAPASPKSEAASVSATNPSQGEDFKMDEGNFK
TPDIDLAKDVFAALGSPAPAAGASGQAPELAPSTADSSVSPAPAKTEKGPVEAKSESQES
ETKPAPAEVKTVPNDATQTKENESKA
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaactaaggatctcatctggactttgtttttcctgggaactgcagtttctctg
caggtggatattgttcccagccaaggggaaatcagcgttggagaatccaaattcttctta
tgccaagtggcaggagatgccaaagataaggacatctcctggttctcccccaacggagaa
aagctcagcccaaaccagcagcggatctcggtggtgtggaacgacgattcctcctccacc
ctcaccatctacaacgccaatatcgatgacgccggcatttacaagtgtgtggtcactggt
gaggatggcagcgagtccgaggccaccgtcaatgtgaagatcttccagaagctcatgttc
aagaatgcaccaaccccacaggagttcagggagggggaagatgccgtgatcgtgtgtgac
gtggtcagctccctccccccaaccatcatctggaaacacaaaggccgagatgtcatcctg
aaaaaagacgtccgattcatagtcctgtccaacaactacctgcagatccggggaatcaag
aaaacagatgagggcacttatcgctgtgagggcagaatcctggcacggggggagatcaac
ttcaaggacattcaggtcattgtgaatgtgccgcccaccgtccaggccaggcagaccatt
gtgaatgccactgccaacctgggccagtctgtcaccttggtgtgtgatgctgaaggcttc
ccagagcccaccatgagctggacaaaggatggggaacagatagagaatgaggaagacgac
gagaagtacatcttcagcgatgacagttctgagctgaccatcaggaaggtggacaagaac
gatgaagccgagtacgtctgcattgctgagaacaaggccggcgagcaggatgcatctata
cacctcaaagtctttgcaaaacccaaaataacctatgtagagaatcagacagccatggaa
ctggaggagcaggtcactcttacctgtgaagcctcgggggaccccattccttccatcact
tggagaacttccacccgaaacatcagcagcgaagaaaagactctggacgggcacatggtg
gtacgcagccacgcccgcgtgtcatccctgaccttgaagagcatccagtacacagatgct
ggagagtacatctgcactgccagcaacaccatcggccaggactcccagtccatgtacctt
gaagtgcaatattcccccaagctacagggccctgtggctgtgtacacttgggaggggaac
caggtgaatatcacctgtgaggtttttgcctaccccagtgctacaatctcctggttccga
gatggccagttactgccaagctccaactttagcaatatcaagatctacaacactccctct
gccagctatctggaggtgaccccagactctgaaaatgattttggaaactacaactgtact
gcagtgaaccgcatcggacaagagtctttggaattcatccttgttcaagcagatacccca
tcttcaccatccatcgaccaggtggagccatactccagcacagcacaggtgcagtttgat
gagccagaggccacaggtggagtgcccatcctcaaatacaaggctgaatggagagcgctg
ggagaagaagcatggcatgtcaagtggtatgatgccaaagaagccaacatggagggcatc
gtcaccatcgtgggcctgaagcctgagacgacatatgaggtgcggctggcggccctcaat
ggcaaggggctgggagagatcagcgcagcctccgggttcaagacacagccagtccgggag
cccagtgcacctaaactcgaagggcagatgggagaggacgggaactctattaaggtgaac
ttgatcaagcaggacgacggcggctcccccatcagacactatctggtcaagtaccgagcg
atctcctccgagtggaaaccagagatcaggctcccgtctggtagtgaccatgtcatgctc
aagtccctggactggaatgctgagtacgaggtgtatgtggtggctgagaaccagcagggg
aagtccaaggcagctcattttgtgttcaagacctcggcccagcccacagccatcccagcc
aatggcagccccacctcaggactgagcacaggggccatcgtgggcatcctcattgtcatc
ttcgtgctgctcctggtggtcgtggacatcacctgctacttcctgaacaagtgtggcctg
cttatgtgcatcgccgtcaatctgtgtggaaaagctgggcctggagccaagggcaaggac
atggaggagggcaaggcggccttctcgaaagatgaatctaaggagcccatcgtggaggtt
cgaactgaggaggaacggaccccaaaccatgacggagggaaacacacagaacccaacgag
accacgccgctgacagagcccgagctgcctgccgacaccacagccactgtcgaggacatg
ctgccttctgtcaccactgtcaccactaactctgacactatcaccgaaacctttgccact
gctcagaacagccccaccagtgagaccaccaccctgacctccagtattgccccgccggcc
acggccgcgccggactcaaattctgtgcccgctgggcaggccaccccttccaaggggccc
agcgttgctgcctcctccccgcccccagcttcagcccctaaggttgcgccccttgttgac
ctgagtgataccccgacctcagctcctgccagcaatttgtcttctagtgtcctggccaat
caaggagctgtcctcagcccaagcaccccagccagtgtgggggaggcctccaaggcccct
gcggccagcaaagccagtcccctagcagcagccgccgcccctgccacagaagccccccag
gccaagcaggaggctcccagcaccaaaggcccggacccggagcccacccagcccggcgct
gcgaagagcccatctgaggcagccacagcccccgctagcccgaagagcgaggctgcctcc
gtcagcgccacaaacccttcccagggcgaggactttaaaatggacgaagggaacttcaag
accccagatattgaccttgcaaaggatgtttttgcagccctgggctctcctgctcccgcc
gctggggccagtggacaagcccctgagcttgctccttccactgcagacagctctgtttcg
cctgcaccagcaaagaccgagaagggccctgtagaagcaaagtcggagtcccaggagtca
gaaacaaagccagcgccagccgaagtcaagacggtccccaacgacgccacacaaacaaag
gagaatgagagcaaagcatga
DBGET
integrated database retrieval system
