Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101959741
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Entry
101959741 CDS
T10664
Symbol
Vta1
Name
(RefSeq) vacuolar protein sorting-associated protein VTA1 homolog
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101959741 (Vta1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101959741 (Vta1)
Membrane trafficking [BR:
iti04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
101959741 (Vta1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
DAG_kinase_N
Motif
Other DBs
NCBI-GeneID:
101959741
NCBI-ProteinID:
XP_005334913
UniProt:
I3M041
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MAALAPLPPLPPQFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFL
SKLMDQLEALKKQLGDNEAVTQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYT
ASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIDEDNDVEENED
AGASSLPTQPSQPSSSSSYDPSSSMPSGGYTGIQIPPGAHAPANTPAEVPHSTGVTSNTI
QPTPQTIPAIDPALFSTISQGDVRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKAL
KLLTTGRE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcttgcacccctgcccccgctccccccccaatttaagagcatacagcatcat
ctgaggaccgctcaggagcatgacaagcgggaccctgtggtggcctattactgtcgttta
tatgctatgcaaactggaatgaagattgatagtaaaactcctgaatgtcgtaaattttta
tcaaagttaatggatcaattagaagcccttaagaaacagttgggtgataatgaagctgtt
actcaagaaatagttggttgtgctcatttggagaattatgctttgaaaatgtttttgtat
gcagacaatgaagatcgtgctggacgatttcacaaaaacatgatcaagtccttctatact
gcaagccttttaatagatgtcataaccgtatttggagaactcactgatgaaaatgtgaaa
cacagaaaatatgcaaggtggaaggcaacatatatccataattgtttaaagaatggagag
actcctcaagcgggccctgttggaattgatgaagataatgatgttgaggaaaatgaagat
gctggagcatcctccctgcccacacagccgtctcagccatcatcatcatcatcttatgac
ccatcatccagcatgccttcaggcggctatactggaatacagattcctccaggtgcacat
gctccagcaaatactccagcagaagtacctcacagcacaggtgtaacgagtaatactatc
caacctactccacagactattccagccattgatcctgcactgtttagtacaatttcccag
ggggacgtccgtctaactccagaggactttgctagagctcagaaatactgcaaatatgct
ggcagtgctttgcagtatgaagatgtaagcactgctgtacagaatctccagaaggctctc
aagttactgactacaggcagagaatga
DBGET
integrated database retrieval system
