KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101959814
Entry
101959814         CDS       T10664                                 
Symbol
Sdc4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04512  ECM-receptor interaction
iti04514  Cell adhesion molecules
iti04820  Cytoskeleton in muscle cells
iti05205  Proteoglycans in cancer
iti05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101959814 (Sdc4)
   04514 Cell adhesion molecules
    101959814 (Sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101959814 (Sdc4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    101959814 (Sdc4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    101959814 (Sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:iti00535]
    101959814 (Sdc4)
Proteoglycans [BR:iti00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   101959814 (Sdc4)
SSDB
Motif
Pfam: Syndecan Protocadherin PARM
Other DBs
NCBI-GeneID: 101959814
NCBI-ProteinID: XP_013214033
LinkDB
Position
Unknown
AA seq 217 aa
MPALRPGRRPRLCQHRRAMGPGPPRHLRGHTPGLSRQAVALIRETEVIDPQDLLEGQYFS
GDLPDDEDVGGPGQEPDDFELSGSGDLDDLGNPRIFPEVIHPLVPLDNHIPERAGPGDRA
PSETKELEENEVIPKRSSPFEEDVSNKVSMSSTAQSSNIFERTEVLIALTVGGIVGILFA
VFLVLLLVYRMKKKDEGSYDLGKKPIYKKAPTNEFYA
NT seq 654 nt   +upstreamnt  +downstreamnt
atgccggccctccggcccggccgccgcccgcgcctctgtcagcaccgccgcgccatgggc
cccgggccgccccgccacctgcggggacacacgccgggcctcagccggcaggccgtcgcc
ctgatccgagaaactgaggtcatcgacccccaggacctcctggaaggccagtacttctct
ggagacctacctgatgatgaggacgttggggggcctgggcaggaacctgatgactttgag
ctgtccggctctggagatctggatgacttggggaaccccaggatcttccctgaagtgatc
catcccttggtgcctctagataaccacatccctgagcgggcagggcctggggaccgggcc
ccctctgaaactaaggagctagaagagaatgaagtcatccccaagaggagctcgcccttt
gaggaggatgtgtccaataaggtgtccatgtccagcactgcccagagcagcaacatcttt
gagagaaccgaggtcctgatagcgctgaccgtgggcggcatcgtgggcatcctgttcgcc
gtgttcctggtcctgctgctggtgtaccgcatgaagaagaaggacgaaggcagctacgac
ctgggcaagaagcccatctacaagaaggcccccaccaacgagttctacgcctga

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