Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101959926
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Entry
101959926 CDS
T10664
Symbol
Snx2
Name
(RefSeq) sorting nexin-2 isoform X2
KO
K17917
sorting nexin-1/2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101959926 (Snx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101959926 (Snx2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101959926 (Snx2)
Membrane trafficking [BR:
iti04131
]
Endocytosis
Macropinocytosis
Sorting nexins
101959926 (Snx2)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101959926 (Snx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
Sorting_nexin
PX
BAR_3_WASP_bdg
FAM92
GrpE
HR1
Arfaptin
HMMR_N
DUF4618
Motif
Other DBs
NCBI-GeneID:
101959926
NCBI-ProteinID:
XP_005330932
UniProt:
I3M7T1
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MAAEREPPPLGDGKPTDFEELEDGEDLFTSTVSTLESSPSSPEPASLPAEDISANSNGPK
PAEVVLDDDREDLFAEATEEVSLDSPEREPILSSEPSPAVTPVTPTALIAPRIESKSMSA
PVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSV
KRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALE
RYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQALSGAGILRMVNKAADAVNKMTIKMN
ESDAWFEEKQQQFENLDQQLRKLHASVEALVCHRKELSANTAAFAKSAAMLGNSEDHTAL
SRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRMKCWQKWEDA
QITLLKKRETEAKMMVANKPDKIQQAKNEIREWEAKVQQGERDFEQISKTIRKEVGRFEK
ERVKDFKTVIIKYLESLVQTQQQLIKYWEAFLPEAKAIA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagagggagcctcctccgctgggggacgggaaacccaccgactttgaggaa
ctggaggacggagaagacttgttcaccagcactgtctccacgctagagtcgagcccatct
tctccagaaccagctagtcttcctgcagaagatatcagtgcaaactctaatggcccaaaa
cctgcagaagttgtactagatgatgacagagaagatctttttgcagaagccacagaagaa
gtttctttggacagcccagaaagggagccaatactctcctcggaaccttctcctgcagtc
acacctgtcacccctactgcactcattgctcctagaattgaatcaaagagtatgtctgct
cctgtgatctttgatagatccagggaggagattgaagaagaagcaaatggagatattttt
gatatagaaatcggtgtgtcggatccagaaaaagttggtgatggcatgaatgcttacatg
gcatatagagtaacaacaaagacttctctttccatgttcagcaagagtgaattttcagtt
aaaagaagattcagtgattttcttggtttgcacagcaaattagcaagcaagtatttacac
gttggttatattgtaccacctgccccggagaagagtatagtaggtatgaccaaggttaaa
gtaggtaaagaagattcatcatccacagagttcgtagaaaaacggagagcagctcttgaa
aggtatcttcaaagaacagtaaaacatccaactttactacaggatcctgatttaaggcag
ttcttggaaagttcagagctgcctagagcagttaatactcaggctctgagtggagcagga
atattgaggatggtgaacaaggctgcggacgctgtcaacaaaatgacaatcaagatgaat
gaatcggatgcatggtttgaagaaaagcaacagcaatttgagaatctagaccagcaactt
aggaaacttcatgccagtgtggaagccttggtctgtcatagaaaagaactttcagccaac
acagctgcctttgctaaaagtgctgccatgttaggtaattctgaggatcatactgcttta
tctagagctctgtctcagcttgcagaggttgaggagaagatagaccagttacatcaagaa
caagcttttgctgacttttacatgttttcggaactacttagcgactatattcgtcttatt
gctgcagtgaaaggtgtatttgaccatcgaatgaagtgctggcaaaaatgggaagatgct
cagattactttgctcaaaaaacgtgaaactgaagcaaaaatgatggttgctaacaaacca
gataaaatacagcaagctaaaaatgaaatacgagagtgggaggcaaaagtacaacaaggg
gaaagagattttgaacagatctctaaaacaattcgaaaagaagtaggaagatttgagaaa
gaacgagtgaaagattttaaaactgttatcatcaagtacttagaatccttagtgcaaaca
cagcaacagctgataaaatactgggaagcattcctacctgaagccaaagccattgcctag
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