Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960132
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Entry
101960132 CDS
T10664
Symbol
Psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
KO
K03063
26S proteasome regulatory subunit T3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03050
Proteasome
iti05010
Alzheimer disease
iti05012
Parkinson disease
iti05014
Amyotrophic lateral sclerosis
iti05016
Huntington disease
iti05017
Spinocerebellar ataxia
iti05020
Prion disease
iti05022
Pathways of neurodegeneration - multiple diseases
iti05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
101960132 (Psmc4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
101960132 (Psmc4)
09164 Neurodegenerative disease
05010 Alzheimer disease
101960132 (Psmc4)
05012 Parkinson disease
101960132 (Psmc4)
05014 Amyotrophic lateral sclerosis
101960132 (Psmc4)
05016 Huntington disease
101960132 (Psmc4)
05017 Spinocerebellar ataxia
101960132 (Psmc4)
05020 Prion disease
101960132 (Psmc4)
05022 Pathways of neurodegeneration - multiple diseases
101960132 (Psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
iti03051
]
101960132 (Psmc4)
Proteasome [BR:
iti03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
101960132 (Psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_lid_3
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_3
IstB_IS21
AAA_7
TsaE
AAA_18
AAA_33
Parvo_NS1
AAA_lid_PRS2_C
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
101960132
NCBI-ProteinID:
XP_005336482
UniProt:
I3MJ99
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggagattggcatcttggtggagaaggctcaggatgagatcccagcattgtctgtg
tcccggccccagactggcttgtccttcctgggacctgagcctgaggatttggaggacctg
tatagtcgctacaagaagctgcagcaagagctagaattcctggaggtgcaggaggaatac
atcaaggatgagcaaaagaacctgaagaaagaattcctgcatgcacaggaggaggtgaag
cgaatccagagcattccgctagtcattgggcagtttttagaagctgtggatcagaacaca
gccattgtgggctctaccacgggctccaactattatgtgcgtattctgagcaccattgat
cgtgagctgctcaagcccaatgcctcagtcgccctccacaagcacagcaatgccctggtg
gatgtgctgcctcctgaggccgacagtagcatcatgatgctcacctcagaccagaagcca
gacgtgatgtatgcggacattgggggcatggacatccaaaaacaagaggtgcgggaggct
gtggagctcccacttacacactttgagctctataagcagattggtattgatcctccccga
ggtgtcctcatgtatggcccacctggctgtgggaagaccatgttggcaaaggctgtggcg
catcacacaacagctgcatttatccgggtcgtgggctccgagtttgtacagaagtacctg
ggtgaaggcccccgcatggtccgggatgttttccgcctggccaaggagaacgcacctgcc
attatcttcatagacgagattgatgccatcgccaccaagagatttgatgcccagacaggg
gctgacagggaggttcagagaatcttgctggagctgctgaatcaaatggatggatttgac
cagaacgtcaatgtcaaggtgatcatggccacaaacagagcagacaccctggatccagcc
ctgctacggccaggacgcctggaccgaaaaattgaatttccactccctgatcgccgccag
aagagattgattttctccactatcaccagcaagatgaacctctctgaagaggttgacttg
gaagattatgtcgcccggccagataagatttcaggagctgatatcaactccatctgtcag
gagagtggaatgttggctgtccgtgagaaccgctacattgtcctggccaaggactttgag
aaagcatacaagaccgtcatcaagaaggatgagcaggagcatgaattttacaagtga
DBGET
integrated database retrieval system
