Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960183
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Entry
101960183 CDS
T10664
Symbol
Paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
iti03041
]
101960183 (Paxbp1)
Spliceosome [BR:
iti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101960183 (Paxbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
NTR2
Motif
Other DBs
NCBI-GeneID:
101960183
NCBI-ProteinID:
XP_005323657
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MDMESEKEEEKPKAGGTFSNALSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFTPHDN
EPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKSQRQKIAEEIGIEGSDDDALVTGEQD
EELSRWEQEQIRKGINIPQVQASQPTEVNMYYQNTYQAMPYGSSYGIPYSYTTYGSSDAK
SQKTDNSAPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRA
IERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQR
RQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRRQAREQT
GKMADHLEGLSSDDEETSTDITNFNLEKDRISKESSKVFEDVLESFYSIDCIKSQFEAWR
SKYYMSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFENMLWFESLLFYGCEEREQ
EKDDVDVALLPTIVEKVILPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVVNAEN
KNTQVYLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQW
YGIFSNKTLQELSIDGLLNRYILMAFQNSEYGDDSIKKAQNVINCFPKQWFMNLKGERTI
SQLENFCRYLVHLADTIYRNSIGCSDVDKRNARENIKQIVKLLASIRALDHAMSVASDHN
VKEFKSLIEGK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatatggagagtgagaaggaagaggaaaagccaaaggctggtggaacattctcaaat
gctttatcttctttgaatgttctccgtccaggagaaattccagatgcagcatttatacat
gctgcaaggaaaaagcgtcaaatggctcgggaattgggagatttcactcctcatgataat
gaacctggtaaaggccgccttgttagagaagatgaaaatgatgccagtgatgatgaagat
gatgatgagaaacgccgtatagttttttcagtgaaagaaaagtcacaaagacaaaaaatt
gccgaggaaataggtattgaggggagtgacgatgatgcattagtaactggagagcaagat
gaagagcttagccgttgggaacaggagcagataagaaaaggaattaatatccctcaggtt
caagcgagtcaacccactgaagtgaatatgtactaccagaacacttaccaggcaatgcct
tatggttcatcctatggcattccttatagttacacgacctatggatcatcagatgccaaa
tctcaaaaaacagataattcagcccctttcaaaactcccagtaatgagatgactcccgtt
actattgatttggtaaagaaacagcttaaagacaggttggactccatgaaagaattgcac
aaaacaaatcgacagcagcatgagaagcatctgcaaagccgagtggattctaccagggct
attgaaagattagaagggtcttctgggggtattggtgaacggtataaatttttgcaagaa
atgcgagggtatgtccaagacttgcttgagtgtttcagtgaaaaggtgccactgattaat
gaacttgaatcagcaatacatcagctgtacaaacagcgagcttcccgccttgtccaaaga
cgacaagatgatattaaagatgaatcttcggagttttcaagccattcaaataaagcactg
atggcaccaaatcttgattcctttgggcgtgatcgggcactgtatcaagagcatgccaaa
cgtcggattgcagagcgagaggccaggaggacccgccgtagacaagctagagaacaaacg
gggaagatggcagatcaccttgaaggcctttctagtgatgatgaagaaacttccacagat
attactaatttcaatctggaaaaagatcgcatttcaaaagagtccagcaaggtttttgaa
gatgtccttgagagtttctattcaattgactgcattaaatcccagtttgaagcatggcgt
tcaaaatactacatgtcctataaggatgcttacattggcctttgtttgccaaagttattc
aaccccctcatcagattgcagctcctcacttggactcctcttgaggcaaaatgtcgtgac
tttgagaatatgctgtggtttgagtctttgctgttttatggttgtgaagaacgagagcaa
gaaaaagatgatgtagatgttgcactactacctaccattgtggaaaaagtgattctccct
aaactaacagtgatagctgaaaatatgtgggatcctttttctacaacacagacttcaaga
atggttggaattacactaaaattaataaatggatatccttcagtagtgaatgcagaaaat
aaaaatacacaggtttacctaaaggcacttttgttgagaatgagaagaactttagatgac
gatgttttcatgcccttatatccaaaaaatgtcttggaaaataaaaattctgggccttat
ttgttttttcaacgacagttttggtcttcagttaagctcttaggaaattttcttcagtgg
tatggcattttctcaaataaaactcttcaggaattatcaatagatggtttattaaataga
tacattctcatggcttttcagaattcagaatatggagatgacagcatcaaaaaagcccaa
aatgtaatcaattgtttccccaaacagtggttcatgaatctgaaaggagaaagaactatt
tctcagttagaaaacttctgccgataccttgtgcacttagcagatacaatttataggaat
agtattgggtgctctgatgtggataaaagaaatgcaagggaaaacataaaacaaatagta
aaacttcttgcaagtattcgagctttggatcatgctatgtctgttgcaagtgaccacaat
gtgaaagaatttaaatctttgattgaaggaaaatag
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