Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960199
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Entry
101960199 CDS
T10664
Symbol
Abcb5
Name
(RefSeq) ATP-binding cassette sub-family B member 5
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101960199 (Abcb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iti02000
]
101960199 (Abcb5)
Transporters [BR:
iti02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
101960199 (Abcb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
DEAD
RsgA_GTPase
AAA_5
AAA_16
AAA_30
Zeta_toxin
AAA_29
AAA_14
Rad17
AAA_21
AAA_28
AAA_7
AAA_33
G-alpha
AAA_18
DUF2207_C
nSTAND1
Motif
Other DBs
NCBI-GeneID:
101960199
NCBI-ProteinID:
XP_021584434
LinkDB
All DBs
Position
Unknown
AA seq
1349 aa
AA seq
DB search
MAEKSVAEGKSSRGDQEAERESPLARQKFTLLAARDLQLTLCSLEGGYQHKAKKGMLFTR
LQHEFNPNSRQEPKNIKLRKAEQNGGCQGLESGGKGMRLVNLYKLSVIRTLQEQLPKTRK
QAVGAIEIFRFADGLDIVLMVLGILASLVNGACLPLMSLVLGEVSDHLTSECLVQTNTTI
SQNCTQFQEKLNEDVTMLTMYYVGIGATALIFGYMQISFWVIAAARQTKRIRKQFFHSVL
AQDIGWFDGCDVGELNTRMTDDINKISDGIGDKIALLFQNMSTFSIGLAIGFVKGWKLTL
VTLSTSPLIMASAAMCSWMVISLTSKELNAYSKAGAVAEEVLSSIRTVIAFGGQEKEIQR
YTQNLKDAKDVGIKKAIASKLSLGAVYFFMNGTYGLAFWYGTSLIFSGEPGYTIGTILAV
FFSVIHSSYCIGAAAPHFETFSIARGAAFNVFQVIDKKPSIDNFSTIGYKPECIEGTVEF
KNVSFNYPSRPSVKILKGLNLKIKSGETVALVGPSGSGKSTAVRLLQRLYDPGDGSITVD
ENDLRALNVRHYREHIGVVSQEPVLFGTTIGNNIRYGRDGVTDKEIEKAAKEANAYDFIM
EFPNKFNTLVGEKGAQMSGGQKQRIAIARALVRNPKILILDEATSALDTESESIVQAALE
KASKGRTTIVVAHRLSTVRSADLIVTLKDGMVVEKGTHAELMAQQGLYYSLAMSQDIKKV
DEEMESMTYSTGRNTSPASLCAVNSIKSDSDDRSEESIQYKETSLPEVSLLKIFKLNKSE
WIFVILGTLASVLNGTVHPIFSIIFAKIITMFEGNNKTTLKNNAETYSMIFFILGIISFV
SFFMQGLFYGRVGEILTMRLRHLAFKAMLYQDIAWFDDKENSTGALTTTLAIDIAQIQGA
TSSRVGVLMQNATNMGLSVIISLVYGWEMTLLILSIAPVLALTGMIETAVVTGFANKDKQ
ELKRAGKIAIEAVENIHTIVSLTREKAFEQTYEETLQTQHRNTLKKGQIIGSCYAFSHAF
VYFAYAAAFRFGAYLFQAGRMTPEGMFIVFTAIAYGAIAMGETLVLAPEYSKAKSGAAHL
FALLEKKPTIDSHSQKGKKPDTCEGNLEFREVSFFYPCRPDVFILRGLSLSIEKGKTVAF
VGSSGCGKSTSVQLLQRFYDPVRGQVLFDGIDAKELNVQWLRSQIAIVSQEPVLFNCSIA
ENIAYGDNSRVVSLDEIKEVANAANIHSFIEGLPEKYNTQVGLKGLQLSGGQKQRLAIAR
ALLRKPKILLLDEATSALDNESEKVVQNALDKARRGRTCLVVAHRLSTIQNADLIVVLHN
GKIKEWGTHQELLRNRDIYFKLVNAQSVH
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaagagtgtggcagagggaaagagctcacgtggtgatcaagaagcagaaaga
gagtctccacttgccagacaaaaattcacactattagctgcacgagatcttcaattgact
ctttgctcactcgaaggtggttaccagcacaaagccaagaaaggaatgttgttcacaaga
cttcaacatgagttcaacccaaacagtaggcaagaacctaaaaacatcaaactcagaaaa
gcagagcagaatggtggctgccaaggactggaaagtggaggaaagggaatgcggttggtc
aacctgtacaaactctcagttataagaacactacaagaacaacttcctaaaacaagaaag
caagctgttggagctattgagatattccgctttgctgatggactggacatcgtgctcatg
gtcctgggaatattggcatcactggtaaatggagcctgtcttcctttaatgtctctggtt
ttaggagaagtgagtgatcaccttactagtgaatgtctagtccaaaccaacacaacaatt
tctcagaactgtactcagtttcaagagaagctgaatgaagacgtgactatgttgactatg
tattatgttggaataggagctactgccttgatttttggctacatgcagatttccttttgg
gtgatagctgcagcacggcagaccaagagaattcgaaaacagttttttcattcggttttg
gcgcaggacatcggttggttcgatggttgtgacgtcggggaactgaacactcgcatgact
gatgacatcaacaaaatcagcgatggcattggagacaagattgctctgttgtttcaaaat
atgtctactttttccattggcctggcaattggcttcgtgaagggctggaaactgaccctg
gtgactctgtccacatcgcctcttatcatggcttcggcagcaatgtgctcttggatggtc
atctcactgaccagtaaggaattgaatgcctattccaaagctggggctgtagcagaagaa
gtcttgtcatccatccgaacagtcatagcttttggaggccaggagaaagaaatccaaagg
tatacacagaatctaaaagatgcaaaagatgttggcatcaaaaaggctatagcttcgaaa
ctctctctcggagctgtgtacttctttatgaatgggacctacggactcgctttttggtat
ggaacctccttgatttttagtggagaacctggttataccatcgggaccattcttgctgtg
ttctttagtgtaatccacagtagttactgcattggagcagcagcccctcactttgaaacc
ttctctatagccagaggagctgcctttaatgttttccaggtgattgataagaaacccagt
atagataacttttcaacaattgggtataaacctgaatgcatagaaggaactgtggaattt
aaaaatgtttctttcaattatccatcaagaccatctgtcaagattctgaaaggtctgaat
ctcaaaattaagtctggagagacagtagccttggttggccccagcggcagtgggaagagc
acagcagtccggcttctgcagaggttatatgatcctggtgatggctctatcacggtggat
gagaatgacctcagagccctaaatgtgcggcattaccgagagcacattggagtggtcagc
caggagcctgtgctgtttggaaccaccattgggaacaatattaggtatggacgagacggt
gtgactgacaaagagattgagaaagcagcaaaggaagcaaatgcttatgacttcatcatg
gagtttcctaataaatttaacacattggtaggagaaaaaggagcccagatgagtggagga
cagaaacagagaatcgcgattgcccgagctttagttcgaaaccctaaaattctgatctta
gatgaggctacatctgccctggatacagaaagtgaatcgattgttcaagctgcactggag
aaagcaagcaaaggtcgcactacaattgtggtagcacaccgactttcaactgttcgaagt
gcagatctgattgtgactctaaaggatgggatggtggtggaaaaaggaacccatgctgag
ctcatggcacaacaaggtctatactattcacttgcaatgtcacaggacattaaaaaagtc
gatgaagagatggagtcaatgacatactctactggaagaaacaccagccctgcttctctg
tgtgctgtgaacagcatcaagtcagactctgatgataggtctgaggaatccatccaatat
aaagagacgagtcttcctgaagtgtctctattgaaaatttttaaattaaacaaatccgaa
tggatttttgtgattctggggacactggcttctgttctaaatggaactgttcatccgata
ttttccatcatctttgctaaaatcataactatgtttgaaggtaataataaaaccacattg
aagaacaatgcagaaacctattccatgatattcttcattctgggcattatttcctttgtc
agtttcttcatgcagggattgttttatggcagagtaggggaaattttaaccatgagatta
agacatttggcattcaaagccatgttatatcaggatattgcctggtttgatgacaaggaa
aacagcacgggagccttgacaacaacattagccatagatattgcacaaatccaaggggca
acaagttcaagggttggtgtcttaatgcaaaatgcaaccaacatgggattgtccgttatc
atttcccttgtatatggatgggagatgacactcttgattctgagcattgctccagtactt
gctctaactggaatgattgaaaccgcagtagtgactggatttgcaaacaaggataagcaa
gaacttaagcgtgcaggaaagatagcaattgaagctgtggagaacatacatactatagtg
tcattaacaagagagaaagcctttgagcaaacatatgaggagactcttcagacccaacac
agaaataccttgaagaaaggacagatcataggaagctgttatgcattcagccatgccttt
gtgtattttgcctatgcagcagcatttagatttggagcctatttatttcaagctggacga
atgacaccagagggcatgttcatagttttcactgcaattgcctacggagctatcgccatg
ggagagacacttgttttggcacctgaatattccaaggccaaatctggggctgctcatctg
tttgccttgttggaaaagaaaccaaccatagacagtcacagccaaaaagggaaaaagcca
gacacatgcgaggggaacttagagtttcgagaagtctccttcttctatccatgtcgccca
gatgttttcatccttcgcggcttatccctcagcattgagaaagggaagacagtagcattc
gttgggagcagtggctgtgggaaaagtacttctgttcaacttctgcagcgattttatgac
cctgtgagaggacaagtgctatttgatggtatagatgcaaaagagttgaatgtacagtgg
ctccgttcccaaatagctatcgtgtctcaagagcctgtgctcttcaactgtagcatcgct
gagaacatcgcctatggtgataacagccgcgttgtatcattagatgagataaaagaagtt
gcaaatgcagcaaatatccattctttcattgaaggtctccctgagaaatacaacacacaa
gttggactgaaaggactacagctttctggaggccagaaacaaagactagccattgcaagg
gctcttctccgaaaaccaaaaattttattgttggatgaggccacttcagcccttgataat
gagagtgaaaaggtggttcagaacgcccttgataaagcccggagagggaggacatgtcta
gtggtggctcacagactctctactatacagaatgcagatctgatagtggttctgcacaat
ggaaaaataaaggaatggggaactcatcaggagctcctaagaaatcgagacatatacttt
aaattagtaaatgcacagtcagtgcattga
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integrated database retrieval system
