Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960230
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Entry
101960230 CDS
T10664
Symbol
Wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101960230 (Wdtc1)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101960230 (Wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
TPR_19
DSE1_N
TPR_1
TPR_2
TPR_17
ANAPC4_WD40
WD40_RFWD3
PAC11
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
TPR_11
Beta-prop_HPS5
TPR_16
Beta-prop_WDR41
Beta-prop_Aladin
ANAPC3
Beta-prop_EIPR1
TPR_14
Beta-prop_WDR35_TULP_N
TPR_6
ASA1
TPR_BSK1_C
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_VPS8
Barstar
Motif
Other DBs
NCBI-GeneID:
101960230
NCBI-ProteinID:
XP_005317714
UniProt:
I3MMI0
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQK
PLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTFLLPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHISPQVELPP
YLERVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDIT
AALFSKNDGEEKKGAGGGGGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTT
TDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLAT
SGIDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGLSSG
GAGASDDEDSSEGQVQCRPS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtcaacattactagagacctcatccgtaggcagatcaaggagcgaggtgcc
ctgagctttgaaaggcgctaccatgtcactgacccctttatccggcggctgggcctggaa
gcagagctgcagggtcactcaggatgtgtcaactgtctggagtggaatgagaaaggagac
ttgctggcctctggttccgatgaccaacacacgattgtgtgggacccgctgcaccacaag
aagctgctctccatgcatacaggacacactgcaaatatcttctctgtcaagttcctgcct
catgctggggaccgcatcttgatcacgggagcagctgactccaaggtgcatgtccatgac
ctgacagtaaaggagactatccacatgtttggagatcacacaaaccgggtgaagcgcatc
gccacagcacccatgtggcccaacacgttctggagtgctgctgaggatgggcttatccgc
caatatgaccttcgggagaacagcaaacactcagaggtgctgattgacctgacagagtat
tgtggccagctggtggaggccaagtgcctcacagtcaatccccaggacaacaactgcctg
gctgtaggggccagtgggcccttcgtgaggctctacgacattcgcatgatccataaccat
agaaagagcatgaagcagagcccatcagcaggtgtacacaccttctgtgacaggcagaag
ccccttccagatggtgcagcccagtattatgtagcaggtcacctgccagtgaagctgcct
gactataacaaccgtctgagagtgctggttgccacctatgtgaccttcagccccaatggc
acagagctgctagtcaacatgggaggtgaacaggtctatttgtttgacttgacttacaag
cagcggccatacaccttcctcttgcctagaaaatgccactcctcaggggaagtccagaac
ggcaagatgtctaccaatggtgtgtccaacggcgtgtctaatggcctgcaccttcacagc
aacggcttccgactgccagaaagtagggggcatatcagcccccaggtggagctgccccca
tatctggaacgtgtgaagcagcaagccaatgaggcttttgcctgccagcagtggacccag
gccattcagctttacagcaaggctgtgcagagggcccctcataatgccatgctctatgga
aaccgagctgctgcctacatgaagcgcaagtgggacggcgaccactatgatgccctaagg
gactgcctcaaggccatatccctaaacccatgccacctgaaggcacacttccgcctggcc
cgctgcctctttgagctcaagtatgtggctgaggccctggagtgcctagacgacttcaaa
gggaagttcccggagcaggcccacagcagcgcttgtgatgctctgggccgtgacatcaca
gctgccctcttctccaaaaatgatggcgaagagaagaagggagctggtggtggtggtggt
ggtggcccagtccgcctccgaagcacaagccgcaaagactccatctcagaagatgagatg
gtcctacgggaacgaagctatgactatcagttccgctactgtggccactgcaacaccaca
acagatatcaaggaggccaatttctttggcagcaacgctcagtacatcgtcagtggctct
gatgatggctccttcttcatctgggaaaaggagaccaccaacctagtacgcgtgcttcag
ggggatgagtccatcgtcaattgcctgcagccgcatcccagctactgcttcctggccacc
agtggcatcgatcctgtcgtgcgactctggaacccccgaccagagagtgaagacctcacc
ggccgagttgtagaagacatggagggtgcttctcaggccaaccagcggcgcatgaatgcg
gaccccttggaggtgatgctgctcaacatgggctaccggatcacaggcctgagcagcggg
ggcgccggggcctctgatgatgaggacagctccgagggtcaggtgcaatgccggcccagc
tag
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