Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960274
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Entry
101960274 CDS
T10664
Symbol
Prdm4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
101960274 (Prdm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101960274 (Prdm4)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101960274 (Prdm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_16
SET
zf-met
zf-C2H2_jaz
Zn_ribbon_Com
PyrI_C
Motif
Other DBs
NCBI-GeneID:
101960274
NCBI-ProteinID:
XP_005322378
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHSAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
PPQYIHPNSINVDGNTALPIANNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHP
SDGHEVALDSTITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSV
SNNLAADTVGHGGVIPIHGNGLELPVVMETDHIASRVNGISDSALSDSIHTVAMSTNSVS
VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPPTLQME
DSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSI
VGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCIITTD
ENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPEHELLFYYSRDYAQQIGVPE
HPDVHLCNCGKECNSYSEFKAHLTSHIHNHLPSQGHSSNHGPGHSKERKWKCSMCPQAFI
SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
LESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKH
LNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAQEEEEEEDSEEEDLADSVA
TEDCRINNAMFSADESLTAHK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacaggatgaatgaaatgaacctgagcccagtggggatggagcagctgacttca
tcctctgtgagcaatgccttgccagtctcaggaagtcacctgggtttggctgcctcacct
actcacagtgccatccctgccccaggtctgccagtggcaattccaaacttgggtccctcc
ctgagctctctgccttctgctttgtctctgatgctcccaatgggtattggggatcgaggg
gtgatgtgtgggttacctgaaagaaactataccctacctccaccaccttacccccacctg
gagagcagttacttcagaaccattttacctggcattttatcttatttagctgacagacca
cctcctcagtacatccatcccaactctataaacgttgatggtaatacagcattacctatc
gccaataacccatcagcacttgatccctatcagtccaatggaaatgttggattagaacca
ggcattgtttcaatagactctcgttctgtgaacacacatggcgcccaaagccttcatccc
agtgatggccatgaggtggctctggactcaacaattaccatggagaacgtttctagagtt
accagcccaatctctactgatggaatggcagaggagcttacaatggatggtgttgcaggc
gagcattcccaaatcccaaatggctccagaagtcatgaacctctctctgtggattctgtg
agcaacaaccttgcagcagacacagtaggacatggtggtgtgatacccattcatgggaat
ggcctggagctccctgtggtcatggaaacagaccacattgcaagtcgagtcaacgggata
tctgatagtgctctcagtgattccatccacaccgtggccatgagcaccaactctgtaagc
gtggcactctctacctcacacaacctcgcctccctagaatctgtttccctccatgaagtt
ggcctcagcttagaacctgtggctgtctcctccatcacccaggaggttgctatgggtaca
ggtcatgtagatgtatcttcagacagtctttcttttgtaccaccgacactgcaaatggaa
gactccaattcaaacaaggaaaacatggcaactttgtttacaatttggtgcactctttgt
gaccgggcctatccttcagattgccctgatcatggaccagtgacttttgttcctgatact
ccaatagagagcagagcaagactttctctcccaaagcagcttgttctccgccagtcaatt
gtgggagcagaagttggtgtatggactggagaaaccattcctgtgcgcacctgctttggg
ccccttattggtcagcagagtcactccatggaagtagcagagtggacagacaaggctgtt
aaccatatttggaagatataccacaatggtgtcctagaattctgcatcattacaactgac
gaaaatgaatgtaattggatgatgtttgtgcgcaaagccaggaatcgagaagagcaaaat
ttggtggcttatccccatgatggaaaaatttatttctgcacctcacaagacatccctcct
gaacatgaactgcttttctattatagtcgggattatgctcagcaaattggtgttcctgaa
catccagatgtgcacctctgtaactgtggcaaggaatgcaattcctactcagagttcaaa
gctcatctgaccagccacatccataaccatctccctagccagggtcacagcagcaatcat
ggtccaggccacagcaaagaaagaaaatggaagtgctcaatgtgcccccaagcttttatc
tctccttccaaactgcacgtccactttatgggtcatatgggtatgaagccccacaagtgt
gacttctgtagcaaggctttcagtgatccaagcaatctgcggacccacctcaagatacat
actggtcagaagaactatagatgtactttgtgtgacaagtctttcacccagaaagctcac
ctggaatcacacatggtcatccacacgggtgagaagaatctcaagtgtgattactgtgat
aagctgtttatgcgcaggcaggacctcaagcagcatgtactcatccacacacaagaacgc
cagatcaagtgtcccaagtgtgataagctgtttttgagaacaaatcacttgaagaagcat
ctcaattctcatgaaggaaagcgagattatgtctgtgaaaaatgtacaaaggcatatcta
accaaatatcatcttacccgccatctgaagacctgtaaaggacccacctccagttcctca
gcacaagaggaggaggaggaagaggactctgaggaggaagatctagcagactctgtggca
acagaagactgtaggattaacaatgctatgttttcagcagacgagtctcttactgctcat
aaataa
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