Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960299
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Entry
101960299 CDS
T10664
Symbol
Cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101960299 (Cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101960299 (Cnot9)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101960299 (Cnot9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
101960299
NCBI-ProteinID:
XP_005330527
UniProt:
I3MNW0
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MHSLATAAPVPTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSF
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcctggcgacagcagcgcctgtgcctactgcactggctcaagtagatagagaa
aagatctatcagtggatcaacgagctgtccagtcctgagacaagggaaaatgctttgcta
gagctaagtaagaagcgagaatctgttcctgaccttgcacccatgctgtggcattcattt
ggtactattgcagcacttttacaggaaattgtaaatatttatccatctattaacccaccc
acgttgacagcacaccagtctaacagagtttgcaatgctctggcattactgcagtgtgtg
gcatcacacccagaaaccaggtcagcttttcttgcagcacacatcccactttttttgtac
ccctttttgcacactgtcagcaaaacacgtccctttgagtatcttcggcttactagcctt
ggagttattggggccttggtgaaaacagatgagcaagaagtaatcaactttttattgaca
acagaaattatccctttgtgtttgcgcattatggaatctggaagtgaactttctaaaaca
gttgccacattcatcctccagaagatcctcttagatgacactggtttggcttatatatgt
cagacatatgaacgtttctcccatgttgccatgatcttgggtaaaatggtcctgcagcta
tccaaagagccttctgcccgtcttttgaagcatgtagtaagatgttaccttcgactctcg
gataatcccagggcacgtgaagcactcaggcagtgcctccctgaccagctgaaggacaca
acttttgcccaggtgctaaaagatgacaccaccacgaaacgctggcttgcacaactggtg
aagaacctgcaagagggacaggtcaccgatccccggggtatccccctgccccctcagtga
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integrated database retrieval system
