Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960328
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Entry
101960328 CDS
T10664
Symbol
Snx1
Name
(RefSeq) sorting nexin-1 isoform X1
KO
K17917
sorting nexin-1/2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
Brite
Membrane trafficking [BR:
iti04131
]
Endocytosis
Macropinocytosis
Sorting nexins
101960328 (Snx1)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101960328 (Snx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101960328
NCBI-ProteinID:
XP_005316733
UniProt:
I3M5W7
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Position
Unknown
AA seq
521 aa
AA seq
DB search
MASGGGGCSASERLPPPFPGLDAESEGTAGGSEPEGGDSDTEGEDIFTGAAAANKPQSPK
RLSILPINNGSKENGIEEEQDQEPQDLFADATVELSLDSTQNNQKTVPAKTLISLPPQEA
TNSSKPQPSYEELEEEEQEDHFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSKQF
AVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAA
LERYLQRVVNHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIK
MNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALHTAQFAKSLAMLGSSEDNT
ALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQ
DAQAMLQKKREAEARLLWANKPDKLQQAKDEITEWESRVTQYERDFERISTVVRKEVIRF
EKEKSKDFKNHVIKYLETLLYSQQQLAKYWEAFLPEAKAIS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggaggtggcggctgtagcgcttcggagagactccctccgccgttccccggc
ttggatgcggagtctgaggggacagccggggggtcagaacccgaaggtggggacagcgac
acagagggggaagacattttcactggcgccgcggcagcgaataaaccccagtctccaaag
agactatctattcttcccatcaacaatggttccaaagaaaatgggattgaagaagaacaa
gaccaggagccacaggatctctttgcagatgccacagtggagctatccctggacagcaca
caaaataatcagaagactgtaccagccaaaacactcatttctcttcctccacaggaagcc
acaaattcttctaagccccagccaagctatgaggagctagaggaagaagaacaggaggat
cactttgatttgacagttggtattactgatcctgagaagataggggatggtatgaatgcc
tatgtggcctacaaagttacaacacagacgagcctaccaatgttcagaagtaaacagttt
gcagtgaaaagaagatttagtgactttctgggtctttatgagaagctttcagagaaacac
tctcagaatggtttcattgtccctcctccacctgagaagagcctaataggaatgacaaaa
gtgaaagttgggaaggaagattcttcctctgcagaatttcttgaaaaacggagggctgct
ctagaaaggtaccttcaaagagttgtgaatcatcctactatgttacaggaccctgatgtc
agggagtttttggaaaaagaagagctgccacgggccgttggtactcagacattgagtggt
gctggtctcctcaagatgttcaacaaagccacagatgcagtcagcaaaatgaccatcaag
atgaatgaatcagacatttggtttgaagagaaactccaggaagtagagtgtgaggaacaa
cgcctaaggaaactacatgctgtggtagaaactcttgtcaatcacagaaaagagctagca
ctgcacacagcccagtttgcaaagagtctagccatgcttgggagttctgaggacaacaca
gcactgtcacgggcactctcccagctggctgaggtggaagaaaaaattgagcagcttcac
caggaacaggccaacaatgacttcttcctccttgctgaactcctgagtgactacattcgc
ctcctggccatagtccgagctgcctttgaccagcgcatgaagacatggcagcgctggcag
gatgctcaagccatgctgcagaagaagcgagaggctgaggctcggctgttgtgggccaac
aagcctgacaagctacagcaggccaaggatgagatcacagagtgggaatctcgggtgact
cagtatgaaagggactttgaaaggatttcaacagtggtccgaaaagaagtgatacggttt
gagaaagagaaatccaaggacttcaaaaaccacgtgatcaagtaccttgagacactcctg
tattcacagcagcagctggcaaagtactgggaagccttccttcctgaggcaaaggccatc
tcctaa
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