Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960346
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Entry
101960346 CDS
T10664
Symbol
Tpr
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03013
Nucleocytoplasmic transport
iti05014
Amyotrophic lateral sclerosis
iti05200
Pathways in cancer
iti05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101960346 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101960346 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
101960346 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101960346 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101960346 (Tpr)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101960346 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Imm70
Motif
Other DBs
NCBI-GeneID:
101960346
NCBI-ProteinID:
XP_013211621
UniProt:
I3N282
LinkDB
All DBs
Position
Unknown
AA seq
2435 aa
AA seq
DB search
MPSSGSVPRSRQRGRPMASRGFDGSRRGSLRRAGAREHPAETADAASPASGSCPSPFFSG
CAASAPVAGPIDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKV
ESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNSQLKALTEKNKELEIAQDRNIS
IQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDFKRLNEKLKESNTTKGELQLKLDE
LQASDVSVKYREKRLEQEKELLRNQNKWLNTELKTKTDELLALGREKGNEILELKCNLEN
KKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNL
YKSAADDSEAKSNELTRAVDELHRLLKEAGEANKATQDHLVEMEESKDKMEKEMLEKIGK
LEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQ
LLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRL
QEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISS
SSEVISQHLVSYRNIEELQQQNQRLLVALRDLGETREREEQETTSSKITELQLKLENSLT
ELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVVIPLQASSLDDISLMSTPKRSSTS
QSVSTPAPVPVIESTEAIEAKAALKQLQEIFENYKKEKADNEKMQNEQLEKLQEQVTDLR
SQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLR
GANEKLAVSEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILER
SETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHL
NTKELLKNAQKEITTLKQHLGNMEVQLASQSSQRTGKGQPGDKEDVDDLLSQLRQAEEQV
NDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKL
MEVEKEKQELQDDKRKAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDC
QEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQLVECK
ASWEEIERMLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNVSLSE
EGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREK
VQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQ
EANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLLSQQKDPDTEEYRKLLSEKEVHTKRI
QQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKIKTEKETIQKDLDAKIIDIQEKV
KTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHISVQEMQELKDSLNQAEN
KSKSLESQVENLQKTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITE
KEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEG
RISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSDPPTAN
IKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEA
MQSEGPVEHVPVFGSTSGSVRSTSPNVQPSLSQPILTVQQQTQATAFVQPTQQNHPQIEP
ANQELSPNLVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRSREEEEDSTVEASDPVSD
DAVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMED
SEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEDDDDENDGEHEDYEED
EEDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGAGESN
QRAADSQNSGEGNTGAAESSFPQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTIH
APPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDG
FAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEEPGG
RSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTSNETTAGDDGDEVFV
EAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRL
QTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7308 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgcctagaagccgccaaagaggacgacccatggcatcccgt
ggctttgacgggtcccgccgcgggagtctccggcgggcaggcgcgcgcgagcacccggcc
gagactgcagacgctgcgtccccggcttcggggtcctgtccttcgcctttcttctccggt
tgtgctgcgtcggctcctgtcgccggcccgatcgacatggcggcagtgttgcagcaagtc
ctggagcgtaccgagctgaacaagctgcctaagtccgtccagaacaaacttgaaaagttc
cttgctgatcagcagtccgagatcgatgggctgaagggacggcatgagaaatttaaggtg
gagagcgaacaacagtatttcgagatagaaaagaggttatcccacagtcaggagagactt
gtaaatgaaacacgtgagtgccaaagcttgcggcttgagctagagaaactcaacagtcaa
ttgaaggcactaactgagaaaaacaaagaacttgaaattgctcaggatcgaaacatttcc
attcagagccaatttacaagaacaaaggaagaattagaagctgagaaaagagacttaatt
agaaccaatgagagactatctcaagaacttgagtatttaacagaggattttaaacgttta
aatgaaaagctaaaagaaagcaatacgacgaagggtgaacttcagttaaaactggatgaa
cttcaagcttctgatgtttctgttaagtatcgagaaaaacgtttggagcaagaaaaggaa
ttgctacgtaatcaaaataaatggctgaatacagagttgaaaaccaaaactgatgaactt
ctggcccttggaagagaaaaaggaaatgaaattctagagcttaagtgtaatcttgaaaac
aagaaagaagaggtttctagactggaagaacagatgaatggtttaaaaacatcaaatgag
catcttcaaaagcatgtagaggatctattgaccaaattaaaggaggccaaagaacaacag
gccagtatggaagagaaattccacaatgaattaaatgctcacataaagctgtctaatcta
tacaagagtgctgctgatgactcagaagcaaagagcaatgagctaactcgggcagtggat
gaactacacagacttttgaaagaagctggagaagccaacaaagcaacacaagatcatctt
gtagaaatggaagaatctaaagataaaatggaaaaagaaatgcttgagaaaatagggaaa
ttggagaaggaattagaaaatgcaaatgacttgctttctgccactaaacgtaaaggagct
atactatctgaagaagagctcgccgctatgtctcccactgcagcagctgtagctaagata
gtgaaacctggcatgaaattaactgagctgtataatgcttatgtggaaactcaggatcag
ttgcttttggagaaactagagaacaaaagaattaataaatacctagatgaaatagtgaaa
gaagttgaagccaaagcaccaattttgaaacgccagcgtgaggaatatgaacgtgcacag
aaagccgtggcaagtttgtctgttaagcttgaacaagcaatgaaggaaattcagcgattg
caggaggacactgataaagccaataaacattcgtctgtacttgaaagagacaatcagaga
atggaaatacaaataaaagatctttcacaacagattagagtgcttttgatggaacttgaa
gaagcaaggggtaatcatgtaattcgtgatgaggaagtaagctctgctgacataagtagt
tcatctgaagtaatatcacagcatctagtatcttacagaaatattgaagaacttcaacag
caaaatcagcgtctgctagtggctcttagagatcttggggaaaccagagaaagagaagaa
caagaaacaacttcctccaaaatcactgaacttcagcttaaacttgagaactctctcact
gaactggagcaactccgtgaatcacgacaacatcagatgcagcttgttgattccatagtt
cgtcagcgtgatatgtatcgtattttattgtcacaaacaacaggagttgtcattccatta
caagcttcaagcttagatgatatttctcttatgtcaactccaaaacgttcaagtacatca
cagtctgtttccactcctgctccagtacctgttattgaatcaacagaggctatagaagct
aaggctgcccttaaacagttgcaggaaatttttgagaactacaagaaagaaaaggcagat
aatgaaaaaatgcaaaatgagcaacttgagaaacttcaggaacaagtcacagatttgcgg
tctcaaaacaccaaaatttctacccagctagattttgcttctaaacgttatgaaatgctg
caagataatgttgaaggatatcgacgagaaataacatccttgcatgagagaaatcagaaa
ctcactgcaactactcaaaagcaggaacagatcatcaacacaatgactcaggacttgaga
ggagcaaatgaaaagctagcagtttcagaagtaagagcagaaaatttgaagaaagaaaag
gaaatgcttaaattgtcagaggtccgtctttctcagcaaagagaatctttgttagctgaa
caacgagggcaaaacttgctgctgactaatctacaaacaattcagggaatactggagcga
tctgaaacagaaaccaaacaaaggcttagtagccagatagaaaagttggagcatgagatc
tctcatctaaagaagaagttggaaaatgaggtggaacaaaggcacacacttactagaaat
ctagatgttcaacttttagatacaaagagacagctagatacagaaacaaatcttcatctt
aacacaaaagaactcttaaagaatgctcaaaaggaaattactacgttgaaacagcacctt
ggtaatatggaagttcagcttgcttctcagtcctcacagagaactggtaaaggtcagcct
ggtgacaaagaagatgtggatgatcttctgagtcagctaaggcaagcagaagaacaggta
aatgacttgaaggagaggctcaaaacaagtactagtaatgtggaacagtatcgagcaatg
gtgacatctttagaagaatctctgaacaaggaaaaacaggtgacagaagaagtacataag
aatattgaagttcgtttaaaagaatcagcggaatttcagacacagttggaaaagaagttg
atggaagtagaaaaggaaaaacaagaacttcaggatgataagagaaaagccatagagagc
atggaacaacagttatctgagttgaagaaaacactttctagtgtgcagaatgaagtgcaa
gaagctcttcagagagcaagcacagctttaagtaatgaacagcaagccagacgtgactgt
caggaacaagctaaaatagctgtggaagctcagaataagtatgagagagaattgatgctc
catgctgctgatgttgaagctcttcaagctgccaaagaacaggtttcaaaaatggcatca
gttcgtcaacatttagaagaaacaacccagaaagcagaatcacagttggtggagtgtaaa
gcatcttgggaagaaatagagagaatgttaaaggatgaagtttccaaaagtgtgtctcgc
tgtgaagatctggagaaacaaaacagattacttcatgatcagattgaaaaattaagtgac
aaggtagttgcctctgtgaaggaaggtgtacaaggtccattgaatgtgtctctcagtgaa
gaagggaaatctcaagaacagattttagaaattctcagatttatacgacgagaaaaagaa
attgctgaaactaggtttgaggtggctcaggttgagagcctgcgttatcgacaaagagtt
gaacttttagaaagagaacttcaggaactacaggatagcttaaatgctgaaagggagaag
gtccaggtaactgcaaaaacaatggctcagcatgaagaactgatgaaaaaaactgaaaca
atgaatgtagttatggagaccaataagatgctaagagaagaaaaggagaggctagaacag
gatctccagcagatgcaagcaaaggtgaggaaactggagttagatattttacccttacaa
gaagcaaatgctgagctgagtgagaaaagcggtatgttgcaggcagaaaagaagttgtta
gaagaggatgtcaaacgttggaaagcacgtaaccagcatttattaagtcagcagaaagat
ccagacacggaagaatataggaagcttctttctgaaaaggaagttcacaccaagcgtatt
caacagttgactgaagaaattgggagacttaaagccgaaattgcaagatcaaatgcatct
ttgactaacaaccagaacttaatccagagtctgaaggaagatttaaataaaataaaaact
gaaaaagaaaccatccaaaaggatttagatgccaaaataattgatatccaagaaaaagtt
aaaactattactcaggtcaagaaaattggacggaggtacaagactcagtatgaagaactt
aaagcacaacaggataaggtcatggaaacttcagctcagtcttctggggaccatcaggaa
cagcatatctcagtccaggaaatgcaggagctcaaagattcactcaaccaagctgaaaac
aagtcaaaatcactggagagtcaagtagagaatcttcagaagacattatctgaaaaagag
acagaagcaagaaatctccaggaacagactgtgcagcttcagtctgaactttcacgactt
cgacaggatcttcaagatagaactactcaggaggagcagctcagacagcaaataactgaa
aaggaggaaaaaactaggaaggctattgtagctgcaaaatcaaaaattgctcatttagcc
ggtgtaaaagatcagctaactaaagaaaatgaggagcttaaacaaaggaatggagcctta
gatcagcagaaagatgaactggatgttcgtatgactgctctgaagtcccagtatgaaggt
cgaattagtcgcttggaaagagaactcagggagcatcaagagagacaccttgagcagaga
gatgagcctcaagaacctaccaataaggtcccagaacagcagagacagatcacattgaaa
accactccagcttctggtgaaagaggaattgccagcacatcagatccaccaacggctaat
atcaagccaactcctgttgtttccactccaagtaaagtgacagctgcagctatggctgga
aataagtcaacccccagggctagtatccgcccaatggttacacctgccaccgttacaaat
cctactactaccccaacagctacagtgatgcccactacacaggtggagtcacaagaagct
atgcagtcagaaggtccagtggaacatgttccagtttttggaagcacaagtggatctgtt
cgttctactagtcctaatgtccagccttctctctctcaacccattttaactgttcagcaa
caaacacaggctacagcttttgtgcagcccactcaacaaaatcatcctcagattgagcct
gcaaatcaggagttatccccaaacttagtagaagtggttcagagttcaccagttgagcga
ccttctacttctacagcagtatttggcactgtttcagccacccccagttcctctttgcca
aagcgtagccgtgaggaggaggaggatagcactgtggaagcatcagaccctgtctctgat
gatgcagtggaaatgcctcttccaaagaagctgaagagtgttacacctgtaggtactgag
gaagaagttatggcagaagaaagtactgatggagaggtagagactcaagtatacaatcag
gattctcaggattccattggagaaggagtcacccagggagattatacacctatggaagac
agtgaagaaacttcccaatccctacaaatagatctcggaccgcttcaatcagatcagcaa
acaacaacttcatcccaggatggccaaggcaaaggagatgatgtcattgtaattgacagt
gatgatgaagaagatgatgatgatgaaaatgatggagaacatgaggattatgaagaagat
gaagaagatgatgatgatgacgaagatgacactgggatgggagatgaaggtgaagacagt
aatgaaggaactggtagtgcagatggtaatgacggatatgaagctgatgatgctgagggt
ggtgatgggactgatccaggtacagaaacagaagaaagtatgggtgcaggtgaaagtaat
cagagagctgctgattcccaaaacagtggtgaaggaaatacaggtgctgcagagtcatct
tttccccaggagatttccagagaacagcagccttcctcagcatctgaaagacagacccct
cgagcacctcagtcaccaagacgcccaccacatccacttcccccacgactgaccattcat
gctccacctcaagagttgggacctccagttcagagaattcagatgacccgaaggcagtct
gtaggacgtgggcttcagttgactccaggaataggtggaatgcagcaacacttttttgat
gatgaagacagaacagttccaagtacgccaactcttgtggtaccacatcgtactgatgga
tttgctgaagctattcattccccacaggtagctggtgttcctaggttccggtttgggcca
cctgaagatatgccacagacaagttctagtcactctgatcttggccaacttgcttctcaa
ggaggtttaggaatgtatgaaacacccctcttcctagctcatgaagaagaacctggtggt
cgaagcgttcccactactcctctgcaagtagcagccccagtgactgtatttactgagagt
acaacctctgatgcttcagagcatgcctctcagtctgttccaatggtgacgacatccacg
ggcactttatctacatcaaacgaaacaacagctggtgatgatggagatgaagtatttgtg
gaagcagaatctgaaggtattagttcagaagcaggtctagaaattgatagtcagcaggaa
gaagaacctgtgcaggcatctgatgagtcagacctcccttccaccagccaggatcctcct
tccagctcttctgtagataccagcagtagtcagccaaagcctttcagacgagtgagactt
cagacaacactgagacaaggtgtccgaggtcgtcagtttaacagacagagaggtgtaagc
catgcaatgggaggaagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
