Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960386
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Entry
101960386 CDS
T10664
Symbol
Cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
101960386 (Cdh17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101960386 (Cdh17)
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Major cadherins
101960386 (Cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
RibLong
DUF2970
Motif
Other DBs
NCBI-GeneID:
101960386
NCBI-ProteinID:
XP_040149791
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MSPALLRSLCLLTLYLTIGYGQEGKFSGPLKPMTFSIFEGQEPSQVIFQFKANPPAVSFE
LTGETDNIFMIQSDGLLYYVRALDRETRATHHLQISALDAQGATVEGPVPITIEVKDIND
NRPMFLQSKYEGSVRQNSRPGKPFMSVNATDLDDPATPNGQLFYQIVIQLPNVNNVMYFQ
IDNKTGAISLTPQGSQQLDPVKNPSYNLVVSVQDMGGQTENSFSDTASVDIKVKENIWKA
PEPVEVEENSTAPHPLKITQVRWNEPGAHYSLSDRDKLPVFPFSIDQEGDIYVTQPLDRE
KKDSYTFYAIAKDENGKPLAFPLEIHVKVRDINDNPPTCPFPVTVFEIQENEGLGSSIGT
FTANDMDEKNTINSILKYKIVAQTPQIPTDGLFLVEEYTGKLQLARQALKKQDTPQYNLT
VEVSDPDFKTSCFVQIHVIDINDQIPIFEKSDYGNLTLPEDTAVGTIILTIQATDADEPF
TGSSKILYRIIQGDSEGRLGVDTDPQTNRGYVTIKKPLDFETAAFSNIVFKAENPEPLVS
GVTYNASSFASLKLILTDVNEAPVFSQDVFQAKVREDVAINTKVGNVTARDPEGLHIRYS
LSGDTRGWLKIDPVTGEIFSVAPLDREAESVYQVQVVATEVGGSSLKSTSNFHLTLMDVN
DNPPRLAKDYTGLFICHPLTAPGSVIFEATDDDQQSFRGPQFTFALGSENLKNDWEVSKI
NGTHARLSTKHTNFEERLYKIAIRINDGGRPPLEGTVFLPVTFCPCVEGSCFRPVDTQEG
RPTVAMAVGILLTTLLVIGIILAVVFIRMKNDKGKDNVENAQTTEVQPLRS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcgctccttcgctcgctgtgtcttcttacactttatttgacaattggatat
ggccaggaggggaagtttagtggacccctgaagcctatgacgttttctatttttgaaggt
caagagccgagtcaagtcatattccagtttaaggccaatcctcctgcagtgagttttgaa
ctaactggggaaacggacaacatatttatgatacaatcagatggacttctgtattatgtt
agagcactggacagggaaacgagagctactcaccacctccagatttcagccctggatgcc
caaggagctacagtggagggcccagtccccatcaccatagaagtgaaggacatcaacgac
aaccgacccatgtttctccagtcaaagtatgaaggctcagtaaggcagaactctcgccca
ggaaaacccttcatgtctgtcaatgctacagacttggatgacccagccactcccaatggc
cagcttttttatcaaattgtcattcagcttcccaatgtcaacaatgtcatgtactttcag
atcgacaacaaaacgggagcaatctcacttaccccacaagggtctcagcaactggatcct
gttaagaatccttcctacaatctggtggtctccgtacaggacatgggaggccagactgag
aattccttcagtgatactgcctctgtggacattaaggtgaaggagaatatttggaaagca
ccagaacccgtggaggttgaagaaaactcgactgctcctcatcccctcaaaatcactcag
gtgcggtggaatgagccaggtgcacactattccttatctgacagagacaagctgccagta
ttcccattctcaattgaccaagaaggagacatttatgtgactcaacccttggacagagaa
aaaaaggattcatatactttttacgccattgcaaaggatgagaacggaaaaccacttgca
ttcccactggaaattcatgtgaaagttagagatattaatgacaatccaccaacatgtcca
tttccggtgactgtatttgagatccaggagaatgaaggactgggaagcagcattgggacc
tttactgccaatgacatggatgaaaagaacactatcaatagtattttaaagtataaaatt
gtggcacaaaccccacaaattcccacagatggactcttcctggttgaggaatatacggga
aagctccagttagctagacaggctttgaagaagcaagatactcctcagtacaacctaaca
gtggaggtgtccgacccagatttcaagacctcctgttttgtgcaaatccatgtcattgat
atcaacgatcagattcccatctttgaaaagtcagattatggaaatctgactctccctgaa
gacacagcggttgggacaatcattctaaccattcaagccactgatgctgatgagcccttt
actggaagttctaaaatcctgtatcggattatacaaggagacagtgaaggaagactgggg
gttgacacagacccccaaaccaatagaggatatgtcacaatcaaaaagcctcttgatttt
gaaacggcagccttctccaacattgtgttcaaagcagaaaaccctgagcctcttgtatct
ggtgtgacgtacaacgcaagctcttttgcctcgttgaagcttattttaacagatgtgaat
gaagcacctgtattttcccaggatgtattccaagcaaaagtcagagaggatgttgccatt
aacactaaagtgggcaacgtgactgccagggatcctgagggtctgcacatcagatattca
ctgagcggcgacacaagaggttggcttaaaattgaccccgtcactggtgagatctttagt
gtggctccgctggacagggaagcggaaagtgtgtatcaggtacaagtcgtggccactgaa
gtaggcgggtcatctttgaagtccacatcgaatttccacctgactctcatggacgtgaat
gacaaccccccacggctcgccaaggactacacgggcctgtttatctgccatcctctcact
gcacctggaagtgtcatttttgaggccactgatgatgaccagcagtcatttcggggtccc
cagtttacatttgcccttggcagtgaaaacttaaaaaatgactgggaagtttccaaaatc
aacggcactcatgccagactctccaccaagcacacaaactttgaagaaagactttataaa
atcgccatccgcattaatgacgggggtcggccacctttggaagggactgtctttttacca
gttactttctgcccatgcgtggaaggaagttgtttccgaccagtagatacacaggaaggg
aggcccactgtggctatggcagttggtatactcctgacaacccttctagtcattggtata
attttagcagttgtgtttatccgcatgaagaatgataaaggcaaagataatgttgaaaat
gctcagacaactgaagtccagcctctgagaagctga
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integrated database retrieval system
