Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960390
Help
Entry
101960390 CDS
T10664
Symbol
Cntn2
Name
(RefSeq) contactin-2
KO
K06760
contactin 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101960390 (Cntn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101960390 (Cntn2)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
101960390 (Cntn2)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
Contactins
101960390 (Cntn2)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
Others
101960390 (Cntn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Ig_4
C2-set_2
Izumo-Ig
Sp38
C2-set
Motif
Other DBs
NCBI-GeneID:
101960390
NCBI-ProteinID:
XP_005329572
UniProt:
I3M4J0
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MPTMETLARRKPHLPLLLLVTMALVASPAWSLAQGSLATFGPVFEEQPVGLLFPEESTEE
QVTLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN
PVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRWLLNEFPN
FIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPR
LFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAEPTLQIPS
VSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPR
PTVRWLRNGEPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQAL
APDFRQNPVRRLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLVI
RNISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLTLQCHASHD
PTMDLTFTWTLDDFPIDFDKPGGHYRRASVKETVGDMTILNAQLRHGGKYTCMAQTVVDS
ASKEATVLVRGPPGPPGGVVVRDISDTTVQLSWSRGFDNHSPIAKYTLQARSLPAGKWKQ
VRTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSRIRTKEAAPSVAPS
GLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTSWQTARVPGADAQYFVYSN
DSIQPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGISSSEMNVTWEP
VRQDTNGILLGYEIRYWKAGDKEAAADRVRTAGLDSNARVTGLHPNTKYHVTVRAYNRAG
TGPASPPANATTMKPPPRRPPGNISWTFSSSSLSIKWDAVVPFQNESAVTGYKMLYQNDL
HPTPTLHLTGKNWIEIPVPEDIGHALVQIRTTGPGGDGIPAEVHIVRNGGTSMMVEDAAV
CPAPHPGAILSHSTAMLILIGYLEL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccatggagacattggccaggaggaagccacatctaccgctgctgctgctggtc
accatggcccttgttgcctccccagcttggagtttggcccagggatccctggccaccttt
gggcctgtctttgaagaacaacctgttggcctgctattcccagaggagtctacggaggag
caggtgacgctggcatgccgtgcccgggccagccctccagccacctataggtggaagatg
aatggcaccgagatgaagctggagccaggttcccgccaccagctggtggggggcaacctg
gtcatcatgaaccccaccaaggcacaggacgctggtgtctaccagtgcctggcctccaac
ccagtgggcactgtggtcagcagggaggccgtcctccgctttggctttctgcaggaattc
tccaaggaggagcgagaccccgtgaagacccacgaaggctggggggtgatgctgccctgt
aacccacctgcccactacccaggcttgtcctaccgctggctcctcaacgagttccccaac
ttcatcccgacggacgggcgccacttcgtgtcccagaccacagggaacctgtacattgcc
cggaccaacgcctcggacctgggcaactactcctgcctggccaccagccacatggacttc
tccaccaaaagcgtcttcagcaaattcgctcagctcaacctggctgctgaagatccccgg
ctcttcgcgcccagcattaaggcccggttcccagcagagacctacgcgctagtgggccag
caggtcaccctggagtgcttcgcctttgggaatcctgtgcccaggatcaagtggcgcaaa
gtagacggctccttgtccccacagtgggccacagccgagcccaccctgcagatccccagc
gtgagctttgaagacgaaggaacatatgagtgtgaggcagagaactccaagggccgcgac
accgtccagggccgcatcattgttcaggctcagcccgagtggctcaaggtgatctcagac
acagaggctgacatcggttccaacctgcgctggggctgcgcggccgctgggaagccccga
cccaccgtgcgctggctgcggaatggggagcctttggcctcccagaaccgggtggaagtg
ttggccggagacctgcgattctccaagctgagcctggaggactcgggcatgtaccagtgt
gtggcagagaacaagcacggcaccatctatgccagcgctgagctggctgtgcaagcactg
gcgcctgatttcaggcagaatccggtcagacgtctgattcccgccgctcggggaggagag
atcgtcatcccctgccagccccgggcagctccgaaggccgtggtgctctggagcaaaggc
actgagattttggtcaacagcagcagagtgacggtaactccggatggcaccttggtcata
aggaacatcagtcggtccgacgagggcaaatacacgtgctttgctgagaattttatgggc
aaagccaacagcaccgggatcctgtctgtgcgtgatgcaaccaagatcactctggccccc
tcaagtgccgacatcaatgtgggtgacaacctcaccttacagtgccacgcctcccatgac
cccaccatggacctcacgttcacctggaccctcgatgacttccccattgactttgacaag
cctgggggtcactataggagagccagtgtgaaggagaccgttggggacatgaccatcctg
aatgcccagctgcgccatggagggaagtacacatgcatggcccagacagtggtggatagt
gcatccaaggaggccaccgttctggtccgaggtccaccaggccccccaggaggcgtggtg
gtgagagacatcagtgacaccactgtccagctaagctggagccgtggcttcgacaaccac
agtcccattgccaagtacaccctgcaggcccgctctctacctgcagggaagtggaagcag
gttcggaccaatcctgccaacatcgagggcaatgccgagaccgcccaggtgctgggcctc
acgccctggatggactatgagttccgggtcttagccagcaacatcctgggcaccggggag
cccagtggcccctccagccgaatccggaccaaggaagcagccccctcagtggcaccatca
ggactcagcggaggaggtggagccccgggagagctcatcgtcaactggactcccatgtca
cgggagtaccagaacggagatggcttcggctacctgctgtccttccgcaggcagggcagc
actagctggcagaccgcccgggtgcccggcgccgatgcccagtacttcgtctacagcaac
gacagcatccagccctacacgccatttgaggtcaagatccgcagctacaaccgccggggg
gatgggcctgagagcctcacagcacttgtgtactcggctgaggaagagcccagggtggcc
cctaccaaggtctgggccaaggggatctcatcatcagagatgaacgtgacctgggaacct
gtgcggcaggacacaaatggcatcctcctggggtatgagatccgctactggaaagctggg
gacaaagaagcagctgctgacagagtgaggacagcagggctagactccaatgcccgagtc
accggcctccaccctaacaccaagtaccacgtgaccgtgcgggcctataaccgcgcgggc
accgggcctgccagtcctcctgccaatgccacaaccatgaaacctcctccccggcgacct
cctggcaacatctcctggactttctcaagctccagtctcagcattaagtgggacgctgtg
gtccctttccaaaatgagtctgcagtcacgggctacaagatgctgtaccagaatgactta
cacccaactcccacactccaccttactggcaagaactggatagaaatcccagtacccgaa
gacattggccacgcccttgtacagattcggaccacgggacctggaggggatggcatcccg
gcagaagttcacatcgtgaggaatggaggcacaagcatgatggtggaagacgcggcagtc
tgcccagccccacaccccggcgccatcctctcccactccacagcgatgctcatcctcata
ggctacctggagctctga
DBGET
integrated database retrieval system
