Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960592
Help
Entry
101960592 CDS
T10664
Symbol
Cntn4
Name
(RefSeq) contactin-4 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101960592 (Cntn4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
101960592 (Cntn4)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
Contactins
101960592 (Cntn4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
Others
101960592 (Cntn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
Sp38
Ig_C17orf99
V-set_CD47
C2-set_2
C2-set_3
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
101960592
NCBI-ProteinID:
XP_040145987
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MRLPWELLVLQSFASCLADDYALHGPVFLQEPSPVMFPLDSEEKKVKLTCEVKGNPKPHI
RWKLNGTDVDVGMDFRYSVVEGSLLINNPNKTQDAGTYQCVATNSFGTIVSREAKLRFAY
LENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLY
IAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKG
ATVKLECFALGNPVPTIVWRRADGRPIARKARRHKSNGILEIPNFQQEDAGIYECVAENS
RGKNVARGQLTFYAQPNWVQKISDIHVAMEENVFWECKANGRPKPTYRWLKNGEPLLTRD
RIQIEQGTLNITVVNLSDAGMYQCVAENKHGVIFSSAELSVIAAGPDFSRTLLKRVTLVK
VGGEVVIECKPKASPKPVYTWKKGKDLLRENERITISEDGNLRIVNVTKSDAGSYTCIAT
NHFGTASSTGNVVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFAWSFNGHLI
DFNRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSATADLIVRGPPGPP
EAVTIDEITDTTAQLSWRPGPDNHSPVTMYVIQARTPFSVGWQAVSTVPELIDGKTFTAT
VVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITW
ETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLASADASRYVFRNESVRPFSPFEVKVGVF
NNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPLEKNRGRIEGYEVKY
WRHDDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSATVNVTTRKPP
PSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNTTSVEL
SLPLDEDYIIEIKPFSDGGDGSSSEQIRIPKISNFYARGSGASTSNACTLSAISTLMISL
TARSSL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgccatgggaactgctggtcctgcagtccttcgcatcgtgccttgcagatgac
tacgcgctgcacggccccgtgttccttcaagagccaagccccgtcatgttccctctggat
tccgaggagaaaaaagtgaagctcacttgtgaagtgaaagggaatcccaagccccacatc
aggtggaagttaaatggaaccgatgttgacgtgggtatggatttccgctacagtgtggtt
gaaggcagtttgctgatcaataaccccaataaaacccaagatgccggcacataccagtgt
gtggcaacaaactcgtttggaacaatcgtcagcagagaagccaagctccggtttgcttat
cttgagaactttaagacgaggacgaggagcacggtgtccgtccgccgcggtcagggcatg
gtgctgctgtgtggcccgccaccccactctggagagctgagctacgcctggatcttcaac
gagtacccttcctatcaggataatcgccgtttcgtgtctcaagagaccgggaatctgtac
attgccaaagtagaaaaatcagatgtcgggaactatacctgtgtggtcaccaataccgtg
acgaatcacaaggtcctggggccacctacacctctgatactgagaaatgacggggtgatg
ggggaatacgagcccaaaatcgaagtgcagttcccagagaccgtcccgactgccaaagga
gccaccgtcaagctagagtgctttgctttaggaaacccggtgccaacgatcgtctggcga
agagccgacgggaggcccatcgccaggaaagccagaagacacaagtccaatggaattctc
gaaatccccaattttcagcaggaggacgccggcatctacgaatgtgtggccgagaactcc
aggggcaaaaacgtagcccgggggcagctgactttctatgctcaacctaattgggttcag
aagatcagtgacatccacgtggccatggaggagaacgtgttttgggaatgtaaagcgaac
gggagacccaagcccacgtacaggtggctgaagaatggcgaaccactgttaactcgggac
agaattcagatcgagcaaggaacgctcaacataaccgtcgtgaatctctcggatgccggg
atgtatcagtgtgtggcagagaataaacatggagttatcttttccagcgcggagctcagc
gtaatagcggcgggtccggatttctcgagaacactcttgaagagagtcactctcgtcaaa
gtgggaggggaggtggtcattgagtgcaagcccaaagcatctccaaaacccgtctacacc
tggaaaaaggggaaggacctattaagagaaaatgaaagaatcaccatctctgaggatgga
aacctccgaatcgtcaacgtgactaaatcggacgctgggagttacacctgcatcgccacc
aaccattttggaactgctagcagcacgggaaacgtggtggtgaaagatcccaccagggtg
atggtccccccttccagcatggacgtcacggtgggagagagcatcgtcctgccatgccag
gtgacccacgatcactccctggacatcgtcttcgcgtggtcctttaacggacacctgata
gacttcaaccgagacggggaccactttgaaagggtcggagggcaggattcagctggggat
ttgatgatccgaaacatccaactgaagcatgctgggaaatacgtctgcatggtccaaacc
agtgtggacaagttatcggccacagcagacctgattgtaagaggtcctccagggccccca
gaggcggtgaccatagacgagatcaccgacaccactgcccagctgtcctggagacccggg
cctgacaaccacagccccgtcaccatgtacgtcatccaagccaggactcccttctccgtg
ggctggcaggcagtcagtacagtcccagaactcatcgatgggaagacattcacagcgacc
gtggtgggcttgaacccttgggtcgaatacgaattccggaccgtcgcagccaacgtgatc
ggcattggggagcccagccggccctctgagaagcggaggacggaagaggcccttcctgaa
gtcaccccggccaacgtcagtggaggtggaggaagcaaatctgaactggttatcacctgg
gagacggtgcccgaggagttacagaacggcagaggctttgggtacgtggtagccttccgg
ccccatggcaagatgatctggatgctcacggtgctggcctcggccgatgcctccagatac
gtgttcaggaatgagagcgtgcgccccttctctcccttcgaggttaaagtgggcgtcttc
aacaacaagggagaaggacccttcagccccaccaccctggtgtattctgcggaagaagaa
cccaccaaaccaccggccagtatctttgccagaagcctttctgcgactgatattgaagtt
ttctgggcctcgccgctggagaagaatagagggcggatcgaaggttacgaggtgaaatac
tggagacacgatgacaaagaagaaaacgctagaaaaattcgcaccgtgggcaatcagaca
tcgaccaaaatcaccaatttaaaaggcagcgccctgtatcacttggctgtcaaggcgtat
aattcggctgggacgggtccctccagtgccacggtcaacgtcaccacccgaaagccacca
cccagccaacctcccggaaacatcatatggaattcatcggactccaaaattatcctgaat
tgggatcaagtgaaggccctggataatgagtcggaagtcaaaggatacaaagtcttgtac
agatggaaccgacagagcagcacatctgtcatcgagaccaatacgacctcggtggagctc
tcgctacctttggatgaggattacatcatcgagatcaagcccttcagcgacggaggggac
ggcagcagcagtgagcagattcgaatcccaaagatatcaaatttctatgccagaggttcg
ggggcttccacgtcgaacgcgtgcaccttgtcggccatcagtaccctcatgatctccctc
acagccaggtctagtttatga
DBGET
integrated database retrieval system
