KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960597
Entry
101960597         CDS       T10664                                 
Symbol
Uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03010  Ribosome
iti04120  Ubiquitin mediated proteolysis
iti04137  Mitophagy - animal
iti04140  Autophagy - animal
iti05012  Parkinson disease
iti05022  Pathways of neurodegeneration - multiple diseases
iti05167  Kaposi sarcoma-associated herpesvirus infection
iti05171  Coronavirus disease
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    101960597 (Uba52)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101960597 (Uba52)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101960597 (Uba52)
   04137 Mitophagy - animal
    101960597 (Uba52)
 09160 Human Diseases
  09172 Infectious disease: viral
   05171 Coronavirus disease
    101960597 (Uba52)
   05167 Kaposi sarcoma-associated herpesvirus infection
    101960597 (Uba52)
  09164 Neurodegenerative disease
   05012 Parkinson disease
    101960597 (Uba52)
   05022 Pathways of neurodegeneration - multiple diseases
    101960597 (Uba52)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:iti03011]
    101960597 (Uba52)
   04121 Ubiquitin system [BR:iti04121]
    101960597 (Uba52)
Ribosome [BR:iti03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    101960597 (Uba52)
  Archaea
    101960597 (Uba52)
Ubiquitin system [BR:iti04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   101960597 (Uba52)
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Ubiquitin_5 zf-C4pol TBK1_ULD OTU1_UBXL Dsc3_N UBL_UBAC1
Other DBs
NCBI-GeneID: 101960597
NCBI-ProteinID: XP_005333044
UniProt: A0A287DC17
LinkDB
Position
Unknown
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKVK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctgacgggcaagaccatcaccctcgaggttgagcccagt
gacaccatcgagaatgtcaaagccaaaattcaagacaaggagggcatcccacctgatcag
cagcgtctgatatttgcaggcaaacagctggaggatggccgcactctctcagattacaac
atccagaaagagtccaccctgcacttggtgcttcgcctgcgaggtggcatcattgagcct
tctctgcgccagcttgcccagaagtacaactgtgacaagatgatctgtcgcaagtgttat
gcccgcctgcacccccgtgctgtgaactgccgcaagaagaagtgtggccacaccaacaac
cttcgccccaagaagaaggtcaaataa

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