Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960680
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Entry
101960680 CDS
T10664
Name
(RefSeq) ABC-type organic anion transporter ABCA8 isoform X2
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101960680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iti02000
]
101960680
Transporters [BR:
iti02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
101960680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
AAA_15
MMR_HSR1
AAA_16
AAA_22
AAA_23
AAA_25
Dynamin_N
nSTAND1
Motif
Other DBs
NCBI-GeneID:
101960680
NCBI-ProteinID:
XP_005328305
LinkDB
All DBs
Position
Unknown
AA seq
1627 aa
AA seq
DB search
MHKRGNMGKRKISVCQQTWALLHKNILKKWRMKREPLMEWMNALLLLLCLYFYPIGHQVK
DFSLWPPVNLGRVDSFNESKFAIEYMPVTNVTQQIMSKVAITSFMTGKEVMGLSDEESIK
ELKADYHEEIVRVIFTNTYSYHLKFLEQRIPISKEHRDHTAHCFEEDEDVDCYMSIFWKE
GFVALQAAINAAIIETTTNHSVMEELMSVTGKYMKIQPFISQGGIATDFFIFFCIISFSP
FIYYASINVTRERKRMKALMTMMGLQDSAFWLSWGLLYAGFIFIMALFLALIIKSTQFFI
LTNFLVVFTLFLLYGLSLIALAFLMSVVVKKSFLTSLVVFLLTVFWGSLGFTALYRYLPV
SLEWIFSFLSPFAFTLGMSQLLHLDYDVNSNVFLDAPVGSNLIIATHFMLAFDTFLYLAL
MMYFEKILPKEFGHQHSPWFFLKSSFWSRQQKADHVILEDKIDSNPSSNDSFEPVSPEFQ
GKEAIRIRNITKEYKGKPEKIEALKDLVLDIYEGQITAILGHSGAGKSTLLNILSGLSVP
TKGSVTIYNNKLSEMDALENIIKITGICPQSNVQFDFLTVEENLRLFAKIRGILPQEVEQ
EIQRVLLELEIQNIQNVLAQNLSGGQKRKLTFGIAILGDPQVFLLDEPSAGMDPFSRHRI
WNLLKERRRDRVILFTTQFMDEADLLADRKVFLSKGKLKCAGSSLFLKKKWGIGYHLSLQ
LNELCAREKITSLVKQHIPDAKLSAESEGKLVYTLPLETTHSFPELYTDLDSNPGLGIEN
YGVSMTTLNEVFLKLEGKSVLDESGINILGEAQGERTGDTERLVEMEQILSSLMEMRKTV
EGMALWGRQICAIAKVRLLKLKHERKALLSLLLILVVGFFPLFLEYILVKVHQNSYTLEL
SPHLYFLAPGQQPQDPLTRLLIINNTGESIDEFVHALERQSIAVEVDATGTRNGVDEPSY
NGAITVFRNEKKYDFLIACNTKRLNCFPVLMDIISNGLLGMLTPSAHIQTEWSTVLRRIW
DNPFEILGYTLFWLVLASTCPPYIAMSSIDDYKNSVRSLLRISGLFPSAYWLGQALVDWP
LYCLFFLFMYLMDYVLNSQETVFTLVNYFIQMLCAIGYAMSLIFLTYVISFTFRKGKKNS
GIWSFCFYVVTVSSVLICVLENSESVPLFFVTFLVPQATLIGCLFLYFHLFMFTVFDDEQ
HTRELFLVFLIPFLHVIIFLFILRCLEWKFGKKPMGKDPFFRISPKSGDVCQNPEEPQEE
DEDVQMERLRTADALNSTDFNEKPVIVASCLRKEYPGKKKHCFSKRKSKVATRNVSFCVR
KGEVLGLLGHNGAGKSTSIKVITGDTKSTAGQVLLQGSSGGDAPGFLGYCPQENVLWPNL
TVREHLEVFATVKGLSRGDAELAIARLVDAFKLQDQLKAAVKTLSAGIKRKLCFMLSILG
SPSVMLLDEPSTGMDPEGQQQMWQAIQAIIRNTERGAILTTHYMAEAEAVCDRVAIMVSG
RLRCIGSIQHLKSKFGKDYLLEMKVKTLAQMEALHAEILRLFPRAARQERYSSLMVYKLP
VEDVKPLAQAFFKLEKLKQSFHLEEYSLSQSTLEQVFLELSKEQELDVFDDELDPSVNWK
LLPQEEP
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaagaggcaacatgggtaaaagaaagataagcgtgtgtcaacaaacttgggct
ttattacataagaacattcttaaaaagtggagaatgaaaagagagccactaatggaatgg
atgaacgcgttgctcctcctactttgtttgtacttctatcctattggtcatcaagttaaa
gacttttctttatggcctcctgtgaacctcggaagggtagattcatttaatgaatccaaa
tttgcaattgaatacatgcctgtcaccaatgtaacccaacagataatgagcaaagtagct
atcacctccttcatgacaggtaaagaagtcatgggactatcagatgaagaaagcattaaa
gaattgaaagcagattatcatgaggaaatagtaagagtcatctttacaaacacatactca
tatcatctgaaattcttggaacaaagaatcccgatcagtaaggaacacagggaccataca
gctcattgttttgaagaagatgaagatgttgactgttacatgtcaatattctggaaggaa
ggttttgtggctcttcaagctgccattaatgctgctattatagaaaccacaacaaatcat
tcagtcatggaggaacttatgtcagttactggaaaatacatgaagatacagccctttatt
agtcaaggaggaatcgcaactgattttttcattttcttctgcatcatctccttttcccca
ttcatttactatgcatccatcaatgtcacgagggagaggaaaaggatgaaggccttgatg
accatgatgggcctgcaggattcagcgttctggctctcctggggtttgctctatgctggc
ttcatcttcattatggcccttttcttggcacttattataaaatctacccagttttttatt
ctgaccaacttcctggtggttttcaccctctttctcctttatggattgtcactgattgct
ctggctttcctgatgagcgtcgtggtgaagaagtctttcctcactagcctagtggtgttc
cttcttactgtcttctgggggagccttggattcacagcgttgtacagatatctcccagtg
tctttggagtggattttcagttttcttagcccgtttgctttcacccttggaatgtcccag
cttttacacttggattatgacgtaaattctaatgtatttcttgatgcaccggttggctcc
aatctaattatagcaacacatttcatgttggcctttgacactttcctctatctggcactc
atgatgtactttgaaaaaattttgccaaaagaatttggacatcaacattcaccctggttt
ttcctgaagtcctcgttttggtcacgacaacaaaaggctgatcatgtgatccttgaagat
aaaatagattccaatccttcatctaatgactcttttgaaccagtgtctccagaattccaa
gggaaagaagccatcagaatcagaaatattacaaaagaatataaaggaaaacctgaaaaa
atagaagctttgaaagacctggtattggacatttatgaaggccaaatcactgcaatcctt
ggtcacagtggagctggaaaatcaacactgttaaatattcttagtgggttgtctgttccc
accaaaggttctgtcaccatctacaataataaactttcagaaatggatgccctagaaaac
atcatcaagatcactggaatttgtccacaatccaatgtgcagtttgacttcctgactgtg
gaagaaaacctcaggctatttgctaaaataagagggattctgccacaagaagtggagcaa
gagatacaaagagttttgctggaattggaaatacaaaatattcagaatgtcctggctcaa
aacttaagtggtggacagaaaagaaaactaacctttgggattgccattttaggagatcct
caggttttcctattagatgaacccagtgctggaatggatcccttctcaagacacagaatt
tggaacctcctgaaagagcgtagaagagaccgtgtgatcctttttactactcagttcatg
gatgaggctgacctcctggcagataggaaagtgtttctctccaaagggaaactgaagtgt
gcgggttcttcattgtttctgaagaaaaagtgggggatcggttatcacctgagtttgcag
ttgaatgaactatgtgctcgggaaaagataacatcccttgttaaacagcacatccctgat
gccaaattatcagcagaaagtgaaggaaagcttgtctatacactacccttagaaacaacc
catagttttccagaactttacacagatcttgatagcaatcctggcctaggaattgagaat
tatggtgtttctatgacaactttgaatgaagtgttcctgaagctagaaggaaaatcagtg
ctcgatgaatcaggtatcaacattctaggagaagcacaaggggaaagaactggggacaca
gaaagacttgttgagatggaacaaattctctcctcacttatggagatgagaaagacagta
gaaggcatggctctctggggtcgacagatctgtgcaattgcaaaggttcgtttgctaaag
ttgaagcatgaaagaaaagctcttctatcactgttgttgattctggtggttggatttttc
cctctttttttggagtatatcttggtgaaagttcatcaaaacagttacactttggaattg
tctcctcatctgtacttcctggctcctggacaacagccacaggaccctctcactcgatta
ttgatcatcaataacacaggggagagcattgatgagtttgtccatgccttggagcgccag
agcatagctgtggaagtagatgcaactggaactagaaatggtgtagatgaaccttcttat
aatggagccataacagtatttcgtaatgaaaagaaatatgactttttaattgcgtgcaat
accaaaagactgaattgtttcccggttctcatggatattattagtaacgggctacttgga
atgcttacaccatcagcacatattcaaactgagtggagcacagttttgaggagaatatgg
gataatccatttgaaatcctgggatacaccttattctggctggttttggcatctacctgc
cctccttacattgccatgagcagcattgatgattacaagaacagcgtgaggtcgctgctg
cggatctcgggcctctttccttccgcctactggctcgggcaggcgctggtggactggccg
ctgtactgcctgtttttccttttcatgtatttaatggattacgtcttgaactcccaagag
actgtatttacgcttgtgaattatttcattcaaatgctgtgtgctattgggtatgccatg
tcccttatcttcttgacatatgtgatttcattcacctttcgcaaggggaaaaaaaatagt
ggtatttggtcattttgcttctatgttgtcaccgtatcctctgtgcttatatgtgtgttg
gaaaactctgaaagtgttccactatttttcgtcacttttttagtaccacaagccacactg
attggctgtctgttcttatattttcatcttttcatgtttactgtcttcgatgatgaacaa
catactagagaactatttctggtctttctaattcccttccttcatgttatcatttttctt
tttattctccgatgtctggaatggaaatttggaaagaaacccatgggaaaggatcccttc
tttagaatttctccaaaaagtggtgatgtgtgtcaaaatccagaagaaccccaggaggag
gatgaagacgttcagatggaaagactgagaacggctgatgccttgaattccacagacttt
aatgagaagccagtcattgtcgccagctgtctgcgcaaggagtacccgggaaagaagaag
cattgcttctctaagaggaagagcaaagtagccaccaggaatgtctcattctgtgtcagg
aaaggtgaagttttagggttgttaggacacaacggagctggtaaaagtacatccattaag
gtgataactggagacacgaaatcaactgctggccaggtgctactccaagggagcagcgga
ggggacgcccccgggttcctggggtactgtcctcaggagaatgtgctgtggcccaacctg
accgtgagggagcacctggaggtgtttgccaccgtgaaggggctgagcagaggtgatgct
gagctcgccattgcaaggttggtggatgcgttcaagctgcaggaccagctgaaggctgcc
gtgaagaccttgtcagccggaataaagagaaagctgtgcttcatgctgagcatcctgggg
agcccgtcagtgatgcttctggatgagccatccaccggaatggaccccgaggggcagcag
cagatgtggcaggcaatccaggccatcattaggaacacagagaggggcgccatcttgacc
acccattacatggcggaggcagaggcagtgtgtgaccgtgtggccatcatggtgtctgga
aggctgaggtgtattggctccatccaacacctaaaaagcaaatttggcaaagattacctg
ttggagatgaaggtgaagaccctcgcacagatggaggccctccatgcagaaatcctgagg
cttttcccccgggctgctcggcaggaaaggtactcttctttgatggtttataagttacca
gtggaggacgtgaaacccttagcccaggctttcttcaaattagagaagctcaaacagagc
ttccacctggaggagtacagcctctcccagtccaccctggagcaggttttcctggagctc
tccaaggagcaggagctggatgtttttgatgatgaacttgatccttcagtgaactggaag
cttctcccacaggaagaaccttag
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integrated database retrieval system
