Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960685
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Entry
101960685 CDS
T10664
Symbol
Nfasc
Name
(RefSeq) neurofascin isoform X8
KO
K06757
neurofascin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101960685 (Nfasc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101960685 (Nfasc)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
L1 family
101960685 (Nfasc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
V-set_CD47
Ig_VEGFR-1-like_5th
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
101960685
NCBI-ProteinID:
XP_005329574
UniProt:
A0A287CVM7
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MARQQPPPWVHAAFLLFFLSLGGAIEIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNIL
IECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFA
RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVA
ERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKA
LRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRA
NGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLAN
AFVSVLDVPPRMLSPRNQFIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHV
YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQ
LECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQ
DLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITD
YVVQFEEDQFQPGVWHDHSKFPGSVNSAVLQLSPYVNYQFRVIAVNEVGSSHPSLPSERY
RTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVT
VWGSRYVVGQTPVYVPYEIRVQAENDFGKAPEPDTVIGYSGEDLPSAPRRFRVRQPNLET
INLEWDHPEHPNGILIGYTLKYVAFNGTKVGKQMVENFSPNQTKFSMQRADPVSRYRFTL
SARTQVGSGEAVTEESPAPPNEATPTAAPPTLPPTTVGATGAVSSTDATALAAATEATTV
PIIPTVAPTTVATTTTTVATTTTTTAATTTESPPTTTTGTKIQESAPDEQSIWNVTVLPN
SKWANITWKHNFGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRD
NEGISSTVITFMTSTAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPV
REKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQ
FNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcagcagccgccgccctgggtccatgcagccttcctcctcttcttcctcagt
ctgggcggagccatcgagattcctatggacccaagcattcagaatgagctgacccagccc
ccaaccatcaccaagcagtcagtgaaagaccacatcgtggacccccgtgataacatcctg
attgagtgtgaagcaaaggggaaccctgcccccagcttccactggactcgaaacagcaga
ttcttcaacattgccaaggaccctcgggtgtccatgaggaggaggtctgggaccctggtg
atcgacttccgcagtggtgggcggcctgaggagtacgagggcgaataccagtgcttcgcc
cgcaacaaatttggcacagccttgtccaacaggatccgtctgcaagtgtccaaatctccc
ctgtggcccaaggaaaacctggaccccgtggtggtccaagaaggcgccccgctgacgctg
cagtgcaaccccccacctggcctgccgtccccagtcatcttctggatgagcagctccatg
gagcccatcacccaggacaaacgcgtctcccagggccacaacggggacctgtatttctct
aatgtgatgctgcaggacatgcagactgactacagctgcaatgcccgcttccacttcacc
cacaccatccagcagaagaatcccttcaccctcaaggtcctcaccacccgaggagttgca
gagagaacacccagcttcatgtatccccagggtacctcgagcagtcagatggtgctccgc
ggcatggacctcctgctagagtgcatcgcttctggggtcccaacaccagacatcgcgtgg
tacaagaaaggtggggacctcccatctgacaaggccaagtttgagaactttaacaaggct
ctgcgtatcaccaatgtgtccgaggaagactctggggagtatttctgcctggcctccaac
aagatgggcagcatccggcacacgatctcggtgagagtgaaggctgctccctactggctg
gatgaacccaagaacctgatcctggctcctggtgaggatgggaggctggtgtgtcgagcc
aatgggaaccccaagcccactgtccagtggatggtgaacggggaacctttgcaatcggca
ccacccaacccaaaccgtgaggtggcgggcgacaccatcatcttccgagacacccagatc
agcagcagggccgtgtaccagtgcaacacctccaacgagcacggctatctcctggccaac
gccttcgtcagtgtgctggatgtcccacctcggatgctctcaccccggaaccagttcatt
agagttattctttacaaccggacacggctggactgcccgttctttgggtctcccattccc
acactgcgatggtttaagaatgggcaaggaagcaacctggatggtggcaattaccatgtc
tatgagaatggcagtctggaaattaagatgatccgcaaagaggaccaaggcatctacacc
tgtgtggccaccaacatcctgggcaaagcggaaaaccaagtccgcctggaggtcaaagat
cccaccaggatctaccggatgcccgaggaccaggttgccaagaggggcaccacggtacag
ctggagtgtcgcgtgaagcacgacccctccctgaagctcaccgtctcctggctgaaggat
gatgagccgctctatattggaaacaggatgaagaaggaagacgactcgctgaccatcttt
ggcgtggcagagcgggaccagggcagttacacgtgcgtcgccagcacggagctggaccaa
gatctggccaaggcctacctcaccgtgctggctgatcaggccactccaactaaccgtttg
gctgccctgcccaaaggacggccagaccgaccccgggacctggagcttaccgacctggcc
gagaggagtgtgaggctgacctggatcccgggggatgacaacaacagccccatcacagac
tatgtggtccagtttgaagaggaccagttccaaccaggggtctggcatgaccattccaag
ttcccaggcagtgtcaactcagctgtcctccaactgtccccatatgtcaactaccagttc
cgggtcattgctgtgaacgaggtcgggagcagccaccccagcctcccatccgagcgctac
cgaaccagtggagcacctcctgagtccaaccccagtgatgtaaagggagaaggaaccaga
aagaacaacatggaaatcacgtggacacccatgaatgccacctctgcctttggccccaac
ctgcgctacattgtcaagtggcggcggagagagactcgagagacctggaacaacgtcact
gtgtggggctctcgctatgtggtggggcagacccctgtctatgtgccctatgagatccgg
gtccaggctgaaaatgactttgggaaggcccccgagcccgacactgtcatcgggtactcg
ggagaagatttacccagtgcccccaggcgtttccgagtccggcagcccaacctggagaca
atcaacctggagtgggatcatccggaacaccccaatgggatcctgattggatacaccctc
aaatacgtggcctttaatggaactaaagtaggaaagcagatggtggaaaacttctctccc
aatcagaccaagttctccatgcagagagcagaccctgtgtcacgctaccgctttaccctc
agcgccaggacgcaggtgggctccggggaagcagtcacagaggagtctccagcgcccccg
aatgaagctactccaactgcagctcctcccacgttgcccccaactaccgtgggcgccaca
ggcgctgtgagcagtactgatgctactgcccttgccgccgccaccgaagccacaacagtc
cccatcatcccaactgtggcgcctaccaccgtcgccaccaccaccaccaccgtcgccaca
actactacaaccactgccgctaccaccacggagagtcctcccaccaccaccaccgggact
aagatacaggaatccgcccccgatgagcagtccatatggaacgtcacggtgctccccaac
agtaaatgggccaacatcacctggaagcacaattttgggcccggaactgactttgtggtt
gagtacatcgacagcaaccatacgaaaaaaactgtccctgttaaggcccaggcccagcct
atacagctgacagacctctatcctgggatgacgtacacattgagggtttattcccgggac
aacgagggcatcagcagtaccgtcatcacctttatgaccagtacagcttacaccaacaac
caggcggacatcgccacccagggctggttcattgggctcatgtgcgccatcgccctcctg
gtgctgatcctgctcatcgtctgcttcatcaagaggagtcgcggtggcaagtacccagtg
cgagaaaagaaggacgttccccttggccctgaagaccccaaagaagaggatggctccttt
gactacagtgatgaggacaacaagcccctgcagggcagccagacgtctctggacggaacc
atcaagcagcaggaaagtgacgacagcctggtggactatggggaaggcggcgaagggcag
ttcaatgaagatggctccttcattggccagtacacggtcaaaaaggacaaggaggaaaca
gagggcaacgagagctcagaggccacatcacccgtcaatgccatctattctctggcctaa
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