Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960698
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Entry
101960698 CDS
T10664
Symbol
Tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X2
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iti03016
]
101960698 (Tsen54)
Transfer RNA biogenesis [BR:
iti03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
101960698 (Tsen54)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
101960698
NCBI-ProteinID:
XP_005332620
UniProt:
I3MJZ6
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MEPEPELGGVEVPAGRVLSAAELLAARSRSQKLPQRSHGPKDFLPDRSATQAERLRLCRE
ELWQLLAEERVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGQQRLHPEEALYL
LECGSIQLFHQDLPLSIQEAYQLLLSGDTVNFLQYQVFSHLKRLGYVVRRFQPNSVLSPY
ERQLNLDGCAQHLEDGTGKRKRNTSSECVNKKVTALKTSLPSTSLAASSPPDCNQNSQCP
VEKPQEPSPAKGPGITFPFLGSLEPSPSLTRQSVGYDRESGKVENGIKGARKPRWNFEQI
SFPNMALDGRYTFLSAPAPELLPANVIGREIDAESWCQKLNQRKEKLSQWDQEKAEARQF
QDINIDPEVQSCSSWREYKELLQRRDMQKSQSYPRHLWSQPITPLLSPGQVDSPALVLQH
ISVLQTTHLADGGAGLLKKSGGLEISFDVYQADAVASFRKNNPGKPYVRMCISGFDEPVP
DLCSLKQLSYQSGDVPLIFALVDHGDISFYSFRDFTLPGDLEH
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgaacccgagctcgggggcgtggaggttcccgcggggcgcgtgctcagtgcc
gcggagctcctggctgcccgctcgcggtcccagaagctgccccagcggtcgcatggcccc
aaggacttccttcccgaccgctcggcgactcaggcggagcggctgcgcctatgtcgcgaa
gagctgtggcagctgctggccgaggagcgcgtggagcgcctgggcagcttggtggcagct
gagtggaggccggaagagggtttcgtggagttgaagtcccctgcgggtaaattctggcag
accatgggcttctcagaacagggccagcagcggcttcaccccgaagaggctttgtatctg
ctggagtgtggctctattcagctcttccaccaagacctgccactatctatccaggaggcc
taccagctgttgctgtctggggatactgtgaatttcctgcagtaccaggtcttcagccac
ctgaagagactgggctatgtggttcgacgattccaaccaaactccgtcctgtccccttat
gagaggcagctaaacttggatggctgtgcccagcacctggaggacgggactggcaagagg
aagaggaataccagctctgagtgtgttaataaaaaagtcacggccctgaagacttccctg
ccatccacgagcctggcagcctccagcccacctgactgcaaccaaaatagccaatgccca
gttgagaaaccccaggagccaagccctgcaaaaggcccagggatcacctttccatttctg
ggttccttggagcccagccctagtctgaccagacagagtgtggggtatgaccgagaaagt
ggcaaggtagagaatggaatcaagggagctcgtaagcctcgctggaactttgagcagatc
tccttccccaacatggctttggatggtcgctacaccttcctatctgccccagccccagag
ttgcttccagccaacgtcattgggcgggagatagatgctgaatcctggtgtcagaagctg
aaccagcggaaggagaagctttcccaatgggaccaggaaaaagcagaggcccggcagttc
caggacataaacatagaccctgaggtgcaatcttgctccagctggcgggaatacaaggag
ctgctgcagaggcgagacatgcagaagagtcagagctacccccgacacctgtggagtcag
cccatcacccccttgctgagtccaggacaggtggactccccagccctggtccttcagcat
atctccgtgctgcagacaacacacctagctgatggaggtgccgggctgctgaagaagtcc
ggaggcttggagatcagttttgatgtttaccaggctgacgctgtggcctcattccgaaag
aataaccctggcaaaccctatgtccggatgtgcattagtggatttgatgagcctgtccca
gacctctgcagcctcaagcaattgtcctaccagagtggggatgtcccactaatctttgcc
ctggtggatcatggtgacatctccttctacagcttcagggacttcacactgcctggggat
ctggagcactga
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