Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960787
Help
Entry
101960787 CDS
T10664
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
iti03041
]
101960787 (Rbm39)
Spliceosome [BR:
iti03041
]
Common components
Common spliceosomal components
General mRNP proteins
101960787 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
IHO1
POP1_C
Motif
Other DBs
NCBI-GeneID:
101960787
NCBI-ProteinID:
XP_040131370
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEVILCFREEEVGWDTEIKD
DVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPL
PTYHNLFPDSMTATQLLVPSRR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggtcatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgaagtcatgaacgaaagcgaagcaaaagtaaggaacgaaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgggaacggaagcgaagtagaagcaaagaaaggaga
cgtagccgctcaagaagtcgagatcgaagattccgaggccgttatagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagtcctgtgagggaa
cctattgataatctaactcctgaggaaagagatgccaggacagttttctgcatgcagttg
gcagcaagaattcgaccaagagatttggaagagtttttctccacagtaggaaaggttcga
gatgtgaggatgatttctgatagaaattcaagacgttccaaagggattgcctatgtggag
tttgtcgatgttagctcagtgcctctagcaataggattaactggccagcgtgttttagga
gtgcccatcatagtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatttacaaaagggaagtgcaggacctatgagactttatgtgggctcattacactttaac
ataactgaagatatgcttcggggaatctttgagccatttggaagaattgaaagtatccag
ctcatgatggatagtgaaacaggtcgctctaagggttatggatttattacattttctgac
tcagaatgtgccaaaaaggctttggaacaacttaatggatttgaactagcaggaaggcca
atgaaagttggtcatgttactgaacgtactgatgcttctagtgctagttcgtttttggat
agtgacgaactggaaaggactggaattgacttgggaacaactggtcgtctccaattaatg
gcaagacttgctgagggtacaggtttgcagattccaccagcagcccagcaggctttacaa
atgagtggctctttggcatttggtgctgtggcagatttgcaaacacgactttcccaacag
actgaagtaatactttgtttcagagaagaagaagttggatgggatacagagatcaaggat
gatgtgattgaagaatgtaataaacatggtggagtcattcatatttacgttgacaagaat
tctgctcagggcaatgtgtatgtgaagtgcccctcaattgctgcagctattgctgctgtc
aatgcgttgcatggcaggtggtttgctggtaaaatgataacagcagcctatgtacctctt
ccaacttaccacaacctcttccctgattctatgacagcaacacaactactggttccaagt
agacgatga
DBGET
integrated database retrieval system
