Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960876
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Entry
101960876 CDS
T10664
Symbol
Hexb
Name
(RefSeq) LOW QUALITY PROTEIN: beta-hexosaminidase subunit beta
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00511
Other glycan degradation
iti00513
Various types of N-glycan biosynthesis
iti00520
Amino sugar and nucleotide sugar metabolism
iti00531
Glycosaminoglycan degradation
iti00600
Sphingolipid metabolism
iti00603
Glycosphingolipid biosynthesis - globo and isoglobo series
iti00604
Glycosphingolipid biosynthesis - ganglio series
iti01100
Metabolic pathways
iti04142
Lysosome
Module
iti_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
101960876 (Hexb)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
101960876 (Hexb)
00513 Various types of N-glycan biosynthesis
101960876 (Hexb)
00531 Glycosaminoglycan degradation
101960876 (Hexb)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
101960876 (Hexb)
00604 Glycosphingolipid biosynthesis - ganglio series
101960876 (Hexb)
00511 Other glycan degradation
101960876 (Hexb)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101960876 (Hexb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
iti03110
]
101960876 (Hexb)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
101960876 (Hexb)
Chaperones and folding catalysts [BR:
iti03110
]
Intramolecular chaperones
Others
101960876 (Hexb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
101960876
NCBI-ProteinID:
XP_005329008
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MEQRQLSPRGSGRPGLPGLLRLLLLLLLLAHTPRALVQPGPALWPLPLSVQDFKRQLHLA
PKEFSIGHGPNSTAGPSCSLLQEAFRRYHDYIFGPYKQQRRPTKFKTGAQLNQLLVSVVL
ESECNAFPSVTSDESYSLLVQEPVAVLKANRVWGVLRGLETFSQLVYEDSFGAFTINESS
IVDSPRFPYRGILIDTSRHYLSVKTILKTLDAMAFNKFNVLHWHIVDDQSFPYQSTTFPE
LSNKGSYSSSHVYTPNDVHMVIEYARLRGIRIIPEFDSPGHTESWGKGQKNLLTACYSPE
QRIQGVGPINPTLNTTYAFLTSIFTEVSKVFPDQFIHLGGDEVNFECWASNPKIQNFMKK
KGFGEDYTKLQSFYMLKLMNIIASLNKVPIVWQEVFDNKAQLIPGTVIQVWKDLNYFEEL
RLITAAGFPVILSAPWYLDWISYGQDWRKYYTVEPLNFSGTEKQKKLILGGEACLWGEYV
DATNLTPRLWPRASAVGERLWSRGDIRDLGDAYARLTRHRCRMVKRGIEAEPLFTGYCNH
ENKL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcgccagctatcgccgcgcggttctggaaggccggggcttccggggcttctt
cggctgctgctgctgctgctgctgctggcgcacaccccgcgcgccttggtccagcccgga
cccgcgctgtggcccctgccgctgtcggtgcaggatttcaagcgccagctgcacctagcc
cccaaggaattttccatcggtcacggccccaattccacggcgggtccctcctgctccctg
ctgcaagaggcctttcggcgataccatgactatatttttggtccctacaagcagcagcgt
cgacctactaaatttaaaactggagcacaattaaatcaacttcttgtctcagttgtcctt
gagtcagagtgtaatgctttccccagtgtgacttcagatgagtcctattctttacttgtg
caagaaccagtggctgtcctcaaggccaacagagtttggggagtattgagaggtttagag
acctttagccagctagtttatgaagattcttttggggctttcaccatcaatgaatccagc
attgttgattctccaagatttccttatcgaggtattttaattgatacatccagacactac
ttgtccgttaagactattcttaaaactctggatgccatggcttttaataagtttaatgtt
cttcactggcacatagtggatgaccagtctttcccttatcagagcaccacttttcctgag
ttaagcaataaaggaagctattcttcgtctcatgtttatacaccaaatgatgttcatatg
gtgattgaatatgcccgattacgagggattcgaatcataccagaatttgatagccccggc
catacagagtcttggggaaaaggtcagaaaaacctcctgactgcatgttacagcccagag
caacgtatacaaggtgttgggcctattaaccccactctaaatacaacttatgcattcttg
acttcaattttcacagaagtcagtaaagtgtttccagatcagttcattcatttgggagga
gatgaagtgaatttcgaatgttgggcatcaaatcccaaaatccaaaatttcatgaagaaa
aaaggctttggtgaagattatacaaaactacaatctttctatatgctaaagcttatgaat
attattgcgtccctaaacaaagtacccatcgtctggcaagaagtttttgataataaagca
cagcttattccaggtacagtaattcaagtgtggaaagatttaaattattttgaggaatta
aggctcatcacagcagctggcttccctgtaatcctttctgctccttggtacttggattgg
attagttatgggcaagattggagaaaatactatacagtggaacctcttaatttctcaggt
actgaaaaacagaaaaaacttatccttggtggagaagcatgtctttggggagaatatgtg
gatgcaactaaccttactccaagattatggcctcgggcaagtgctgttggtgaaagactc
tggagtcgtggagatatcagggaccttggtgatgcttatgctagactaacaaggcaccgc
tgcagaatggtcaaacgtggaatagaagcagaaccgctgtttactggatattgtaaccat
gagaacaagctgtaa
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