KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960877
Entry
101960877         CDS       T10664                                 
Symbol
Snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03040  Spliceosome
iti05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101960877 (Snrpd1)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    101960877 (Snrpd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:iti03041]
    101960877 (Snrpd1)
   03032 DNA replication proteins [BR:iti03032]
    101960877 (Snrpd1)
Spliceosome [BR:iti03041]
 Complex A
  U1 snRNP components
   Sm proteins
    101960877 (Snrpd1)
  U2 snRNP components
    101960877 (Snrpd1)
 Complex B
  U1 snRNP components
    101960877 (Snrpd1)
  U4/U6.U5 tri-snRNP components
    101960877 (Snrpd1)
 Complex C
  U2 snRNP components
    101960877 (Snrpd1)
DNA replication proteins [BR:iti03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     101960877 (Snrpd1)
SSDB
Motif
Pfam: LSM EBNA2_Core Gemin7 Hfq Phage_Hfq SM-ATX API5
Other DBs
NCBI-GeneID: 101960877
NCBI-ProteinID: XP_005329088
UniProt: I3LWQ5
LinkDB
Position
Unknown
AA seq 119 aa
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaagctcgtgagatttttgatgaaattgagtcatgaaactgtaaccattgaattgaag
aatggaacacaggtccatggaacaattacaggtgtagatgtcagcatgaatacacatctt
aaagctgtgaaaatgaccctgaagaacagagaacctgtacagctggaaacattgagtatt
cggggaaataacattcgatactttattctgccagacagtttacctctggatacactactt
gtggatgttgaacctaaggtgaaatctaagaaaagggaagctgttgcaggaagaggccga
ggccgaggaagaggaagaggacgtggccgtggaagaggaagagggggccctaggcgataa

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