KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960999
Entry
101960999         CDS       T10664                                 
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A
  KO
K04344  voltage-dependent calcium channel P/Q type alpha-1A
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04010  MAPK signaling pathway
iti04020  Calcium signaling pathway
iti04721  Synaptic vesicle cycle
iti04723  Retrograde endocannabinoid signaling
iti04724  Glutamatergic synapse
iti04725  Cholinergic synapse
iti04726  Serotonergic synapse
iti04727  GABAergic synapse
iti04728  Dopaminergic synapse
iti04730  Long-term depression
iti04742  Taste transduction
iti04930  Type II diabetes mellitus
iti05017  Spinocerebellar ataxia
iti05032  Morphine addiction
iti05033  Nicotine addiction
iti05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101960999
   04020 Calcium signaling pathway
    101960999
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    101960999
   04727 GABAergic synapse
    101960999
   04725 Cholinergic synapse
    101960999
   04728 Dopaminergic synapse
    101960999
   04726 Serotonergic synapse
    101960999
   04730 Long-term depression
    101960999
   04723 Retrograde endocannabinoid signaling
    101960999
   04721 Synaptic vesicle cycle
    101960999
  09157 Sensory system
   04742 Taste transduction
    101960999
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    101960999
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    101960999
  09165 Substance dependence
   05032 Morphine addiction
    101960999
   05033 Nicotine addiction
    101960999
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    101960999
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:iti04040]
    101960999
Ion channels [BR:iti04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   101960999
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 101960999
NCBI-ProteinID: XP_040146928
LinkDB
Position
Unknown
AA seq 1468 aa
MTPPGPSDTPQFLLPAPHGDRGFHRGTRTDTVQLRRIPFPRGKTPVAGRVAPPGSSVSKP
RVGPGTLGATELACQPGGTVASGLWPGPVPKLYTLLNVFLAIAVDNLANAQELTKDEQEE
EEAANQKLALQKAKEVAEVSPLSAANMSIAVPRGHWGLWNVHRLMSTALASVAISEAMTM
LKATPEVPALPLAAEKEQQRNQKAARSVWEQRTSEMRKQNLLASREALYPGLDPDEPGDE
AADDKPERRARHREGSRPARGGEGEGEGPDGGERRRRHRHGPPATYDADARREDKDRRHR
RRKENQGTGVPVSGPNLSTTRPIQQDLGRQDAPLAEDMDNLKNNKLATAEPASPHDSLGP
AGAPQSPAKMGNSTVPGPTPAPAGNPHSSAGRRVPNDPGPPSHPGAPKAPENSLIVTNPS
SGQDASARTGRPEHTAVDIPPPGPPLNHTVVQVNKNANPDPLPRKEEEKKEEEEEPGEDG
PKPMPPYSSMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRN
NVLRYFDYVFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTSST
RGNSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFI
FAVVAVQLFKGKFFHCTDESKEFEKDCRGKYLLYEKNEVKARDREWKKYEFHYDNVLWAL
LTLFTVSTGEGWPQVLKHSVDATFENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALI
IITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQDKRSFQYRMWQFVVSPPFEY
TIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECLLKVMAFGILNYFRDAW
NIFDFVTVLGSITDILVTEFGNPNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQS
FKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDVEDEDSDEDEFQITEHNNFRTFFQALML
LFRSATGEAWHNIMLSCLSGKPCDKNSGILTADCGNEFAYFYFVSFIFLCSFLMLNLFVA
VIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRMPYPDMYQMLRHMSPPLGLGKK
CPARVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDAELRKEMM
AIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQNRTPLMF
QRMEPPSPSQEGGPGQNALPSTQLDPGVSLMAHEGGIKESPSWVTQRAQEMFQKTGTWSP
ERGPPADLPNSQPSSQSVEMREMGTDGYSDSEHYLPMEGQARAASMPRLPAENQTISDTS
PMKRSASVLGPKARRLDDYSLERVPPEENQRHHQRRRDRGHRASERSLGRYTDVDTGLGT
DLSMTTQSGDLPSKERDQERGRPKDRKH
NT seq 4404 nt   +upstreamnt  +downstreamnt
atgaccccacccggccccagtgacaccccccagttccttctgccagcaccacacggggac
aggggcttccacagaggaacccggacggacacagttcagctgaggcgaatccccttccca
cgagggaagaccccggtggccgggcgtgtggccccgccaggctcctcggtctcgaagccg
cgcgtgggccctggcactctcggagccacggagctggcctgccagccgggcgggacagtg
gcctcgggactgtggcctgggcctgtccctaagctgtacaccctcctgaatgtgttcttg
gccatcgccgtggacaacctggccaacgcccaggagctcaccaaggacgaacaagaggag
gaggaagccgccaaccagaagctcgcgctgcagaaggccaaggaggtggcggaagtgagc
cccctgtcggcggccaacatgtccatagctgtgccacgcgggcactgggggctgtggaac
gtgcacaggctcatgtccaccgccctggcctccgtggccatctccgaggccatgacgatg
ctcaaagccaccccagaggttcctgcgctgccgttggcggcagagaaggagcagcagagg
aaccagaaggcggcgcgctcggtgtgggagcagcgcacgagcgagatgcgcaagcagaac
ctgctggccagccgcgaggcgctctaccccggcctggaccccgatgagcccggggacgag
gcggccgacgacaagcccgagcgccgggcgcgccaccgcgagggcagccggcccgcccgc
ggcggagagggcgagggcgagggccccgacgggggcgagcgcaggaggcgacaccggcac
ggccctcccgccacctacgacgcggacgcgcggagggaagacaaggatcgccggcaccgg
cggaggaaagagaaccagggcaccggggtccctgtgtccggccccaacctgtccaccacg
cgtccaatccagcaggacctgggccgccaggacgcgccgctggccgaggacatggacaac
ctgaagaacaacaagctggccactgcggagccagccagtccccacgacagcctgggcccc
gccggcgcaccccagagccccgccaagatggggaacagcacggtccccggcccgacgcct
gccccagccggcaacccgcacagcagcgccggccgccgggtgcccaatgacccggggccc
ccgtcacaccccggcgcccccaaggcccccgagaacagcctcatcgtcaccaaccccagc
agtggccaggacgcctcggccaggaccgggaggcccgagcacacggccgtggacatcccg
cccccagggccgcccctcaaccacacggtcgtccaagtgaacaaaaacgccaaccccgac
ccgctgccgcggaaagaggaggagaagaaggaggaggaggaggagcccggggaggacggc
cccaagcccatgcccccctacagctccatgttcatcctgtccaccaccaacccccttcgc
cgcctgtgccattacatcctcaacctgcgctacttcgagatgtgcatcctcatggtcatc
gccatgagcagcatcgcgctggccgccgaggaccccgtgcagcccaacgcgccccgcaac
aatgtgctgcgatatttcgactacgttttcactggcgtcttcacctttgagatggtcatc
aagatgatcgacctggggctggtcctgcaccagggcgcctacttccgcgacctctggaac
attctggacttcatagtggtcagtggggccctggtggcctttgccttcacgagcagcaca
cgtggcaatagcaaagggaaggacatcaacaccatcaaatctctccgagtcctccgggtg
ctacgacctctgaaaaccatcaagcggttgccaaagctcaaggccgtgttcgactgcgtg
gtgaactcgctcaagaacgtcttcaacatcctcatcgtctacatgctcttcatgttcatc
ttcgccgtggtggccgtgcagctcttcaagggcaagttcttccactgcaccgacgagtcc
aaggagttcgagaaggactgccgcggcaagtacctgctctacgagaagaacgaggtgaag
gcccgggaccgggagtggaagaaatacgagttccactacgacaacgtgctgtgggccctg
ctgaccctcttcaccgtgtccacgggagaaggctggccgcaggtcctcaagcactcggtg
gacgccactttcgagaaccagggccccagcccggggtaccgcatggagatgtccatcttc
tacgtggtctacttcgtggtcttccccttcttctttgtcaacatctttgtggccttgatc
atcatcaccttccaggaacagggggacaagatgatggaggagtacagcctggagaagaac
gagcgggcctgcatcgacttcgccatcagtgccaaaccgctgaccagacacatgccgcag
gacaagcgcagcttccagtaccgcatgtggcagtttgtggtgtccccgcctttcgagtac
accatcatggccatgatcgccctcaacaccatcgtgctgatgatgaagttctacggcgcc
tcggtggcctatgagaacgctctgcgggtgttcaacatcgtcttcacctcgctcttctcc
ctggagtgcctgctcaaggtcatggcctttgggattctgaattatttccgcgatgcctgg
aacatcttcgactttgtgactgttctgggcagcatcacagacatcctcgtgaccgagttt
gggaatccgaataacttcatcaacctgagttttctccgcctcttccgagctgcccggctc
atcaaactcctccgtcagggttacaccatccgcattcttctctggaccttcgtgcagtcc
ttcaaggccctgccctatgtgtgcctgctgattgccatgctcttcttcatctacgccatc
atcgggatgcaggtgtttggcaacatcggcatcgacgtggaggacgaggacagtgatgag
gacgagttccaaatcactgagcacaacaacttccggaccttcttccaggcgctcatgctt
ctcttccggagtgccaccggggaagcctggcacaacatcatgctctcctgcctcagtggg
aagccctgtgacaagaactcgggcatcctgaccgccgactgtggcaacgagttcgcttac
ttctacttcgtgtccttcatcttcctctgctcctttctgatgctgaacctcttcgtggcc
gtcatcatggacaactttgagtacctcacccgagactcctccatcctgggcccccaccac
ctggacgaatacgtgcgtgtctgggccgagtacgaccctgccgcttggggccgcatgcct
tacccggacatgtatcagatgctgagacacatgtctccgcccctgggtctggggaagaag
tgtccggccagagtggcctacaagaggctcctgcggatggatttgcccgtcgcggatgac
aacacggtccacttcaactccaccctcatggcgctgatccgcacagccctggacatcaag
atagccaagggtggggccgacaagcagcagatggacgcagagctgcggaaggagatgatg
gccatctggccaaacctgtcccagaagacgctggacctgctggtcacacctcacaaatcc
acggacctgacggtggggaagatctacgcagccatgatgatcatggagtattaccggcag
agcaaggccaagaagctgcaggccatgcgcgaggagcagaaccggacccctctcatgttc
cagcgcatggagcccccgtccccgtcacaggaggggggacccggccagaatgccctcccc
tccacccagctggaccccggagtcagcctgatggctcatgaaggcggcatcaaggagagt
ccgtcctgggtgacgcagcgggcccaggagatgttccagaagacgggcacgtggagccca
gagcgagggcccccggccgacctgcccaacagtcagcccagctctcagtcggtggagatg
cgcgagatgggcaccgatggctactcggacagcgagcactacctccccatggaaggccag
gcccgcgccgcctccatgccccgcctcccggccgagaaccagaccatctccgacaccagc
cccatgaagcgctcagcatcggtgctgggccccaaggctcggcgcctggacgactactcc
ctggagagggtccccccagaggagaaccagcggcaccaccagcgccgccgggaccgcggc
caccgcgcctctgagcgctccctgggccgctacacagacgtggacacaggcttgggaacc
gacctgagcatgaccacccagtccggggacctgccttccaaagagcgggaccaggaacgg
ggccgacccaaggaccggaagcac

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