KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961033
Entry
101961033         CDS       T10664                                 
Symbol
Trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
  KO
K22399  pachytene checkpoint protein 2
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:iti00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    101961033 (Trip13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:iti03036]
    101961033 (Trip13)
Chromosome and associated proteins [BR:iti03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Others
     101961033 (Trip13)
SSDB
Motif
Pfam: AAA_lid_TRIP13_C AAA TRIP13_N AAA_22 AAA_16 nSTAND3 Viral_helicase1 AAA_14 AAA_18 AAA_33 AAA_5 NPHP3_N AAA_28 AAA_25 TsaE RuvB_N RNA_helicase Cytidylate_kin ABC_tran ATPase_2 AAA_11 AAA_24 AAA_30 NACHT AAA_17 AAA_7 IstB_IS21 bpMoxR DUF815 TIP49 ATPase AAA_19 PduV-EutP Rad17 SLFN-g3_helicase Mg_chelatase PhoH AAA_3 nSTAND1 Parvo_NS1 NTPase_1
Other DBs
NCBI-GeneID: 101961033
NCBI-ProteinID: XP_040129327
LinkDB
Position
Unknown
AA seq 385 aa
MATLYLLCAVCFPSTAKKEDIKLSVRKLLKRHNIVFGDYTWTEFDEPFLTRNVQSVSIVD
TELKAKDPQPIDLSACAVALHIFQLNEDGPSSENLEEETENIIAANHWVLPAAEFHGLWD
SLVYDMEVKSHLLDYVTTTLLFSDKNVDSNLITWNRVVLLHGPPGTGKTSLCKALAQKLT
IRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTRMFQKIQDLIDDKEALVFVLIDEVESL
TAARSACRAGAEPSDAIRVVNALLTQIDQIKRPDLYLAFVGLAPCVTVCLCPQCQIIYPR
QQLLTLRELEMIGFIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYIQAPTVTI
EGFLQALSLAVDKQFEEKKKLSPCI
NT seq 1158 nt   +upstreamnt  +downstreamnt
atggccaccctgtatctgttgtgtgctgtgtgttttcccagcactgcaaagaaagaagac
attaagctgagcgtccggaagctgctcaaaaggcacaacatcgtgtttggtgactacacg
tggaccgagtttgatgaaccttttctgaccagaaatgtgcagtctgtgtccattgttgac
acagaactgaaggctaaagacccccagcccattgacttgagtgcctgtgcggtcgcgctc
cacatcttccagctgaatgaagacggccccagcagcgagaacctggaggaggagacagaa
aatatcatcgcagcaaaccactgggtgctgcctgcagctgagttccacgggctctgggac
agcctggtgtacgacatggaggtcaagtcgcacctcctggattacgtgacgacgaccttg
ctgttctcagacaagaacgtggacagcaacctcatcacctggaaccgcgtggtgctgctg
cacgggcctccaggaactgggaagacgtccctgtgtaaggccctggcccagaagctcacc
atcagactgtcgagcaggtaccggtatggccagctaattgaaataaacagccatagcctc
ttctctaagtggttttcagaaagtggcaagctggtgaccaggatgttccagaagatccag
gacctgattgatgacaaggaggcgctggtgttcgtgctgattgacgaggtggagagtctc
acagcagcacgcagtgcctgcagggctggtgccgagccctcggatgctatccgcgtggtc
aacgccctcttgacccagatcgatcagatcaaaagacctgatttgtatttggcctttgtt
ggccttgcgccctgtgtaactgtgtgcctctgtccccagtgccagatcatatacccccgc
cagcagcttctgactctccgagagctagagatgatcggcttcattgaaaacaacgtgtcc
aagttgagcctccttctgagtgaaatttcaaggaagagcgagggcctgagtggccgggtc
ttgaggaagctccctttcctggctcatgcactatacatccaggcccccaccgtcaccatc
gagggcttcctccaggcgctgtctctggcggtggacaagcagtttgaagagaagaagaag
ctctcaccctgtatttga

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