Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961062
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Entry
101961062 CDS
T10664
Symbol
Clstn2
Name
(RefSeq) calsyntenin-2
KO
K22660
calsyntenin 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Cadherin related
101961062 (Clstn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101961062
NCBI-ProteinID:
XP_021583983
LinkDB
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Position
Unknown
AA seq
963 aa
AA seq
DB search
MVQSPQAATQVQGDGPCKSKQQLSFSVLVSGGSRRRRLLAAKVNKHKPWIETSYHGVITE
NNDTVILDPPLVALDKDAPVPFAGEICAFKIHGQELPFEAVVLNKTSGEGRLRAKSPIDC
ELQKEYTFIIQAYDCGAGPRETAWKKSHKAVVHIQVKDVNEFAPTFKEPAYKAIVTEGKI
YDSILQVEAIDEDCSPQYSQICNYEIVTTDVPFAIDRNGNIRNTEKLSYDKQRQYEILVT
AYDCGQKPAAQDTLVQVDVKPVCKPGWQDWTKRIEYQPGSGSVPLFPSIHLETCDGAVSS
LQVTTELQTNYIGKGCDRETYSEKSLQKLCGASSGIIDLLPSPSAATNWTAGLLVDSSEM
IFKFDGRQGAKIPDGIVPKNLTDQFTITMWMKHGPSPGVRAEKETILCNSDKTEMNRHHY
ALYVHNCRLVFLLRKDFDQADTFRPAEFHWKLDQICDKEWHYYVINVEFPVVTLYMDGAT
YEPYLVTNDWPIHPSHIAMQLTVGACWQGGEVAKPRFAQFFHGSLASLTIRPGKMESQKV
ISCLQACKEGLDINSLESLGQGIKYHFNPSQSILVMEGDDIGNVNRALQKVSYINSRQFP
TAGVRRLRVSSKVQCFGEDVCISIPDVDAYVMVLQAIEPQITLQGTDRFWRPASQFESSR
GVILFPDIKIVSTFAKTEAPGDVKSTAPKSAVLEEMLHNLDFCDILVLGGDLDPRQECLE
LSHSELHQRHLDATNSTAGYSIYGVGSMSRYEQVLRHIRYRNWHPTSLDTRRFRIKCSEL
NGRYTSNEFNLEVSVLHEVRASDKEHVNHLIVQPPFLQSVHHPESHSSIQRSSVVPSIAT
VVIIISVCMLVFVVAMGVYRVRIAHQHFMQETEAAKEAEMDWDDSALTITVNPMEKHEEP
GHGEEESEGEEEEEEEAEEDVSSSSSDSDDSEEEEEEGMGRGRHERSGARQAQLEWDDST
LPY
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggtacagagccctcaagctgccacccaggtccaaggcgatggaccctgcaagtccaag
cagcagttaagtttttcggttctggtcagcgggggcagccggcggcgccgcctcctcgcg
gctaaagttaacaagcataagccatggatcgagacctcttatcacggagtcataactgag
aacaatgacacagtcattttggatccaccactggtagccctggataaagatgcaccagtt
ccttttgcaggggaaatctgtgccttcaagatccatggccaggagctgccctttgaggcc
gtggtgctcaacaagacatctggggagggccgcctccgagccaagagccccattgactgt
gagctgcagaaggagtacacgttcatcatccaggcctacgactgcggtgccgggccccgg
gagacggcctggaagaagtcacacaaggccgtggtccatatccaggtgaaggatgtcaac
gagtttgctcccaccttcaaagagcccgcctacaaggccatcgtgacggagggcaagatc
tatgacagcatcctgcaggtggaggccatcgacgaggactgctccccccagtacagccag
atctgcaactacgaaattgtcacgacagatgtgccttttgccattgacagaaatggcaac
atcaggaacactgagaagctcagctatgacaagcaacgccagtatgagatcctggtgaca
gcgtatgactgtggacagaagcctgctgctcaggacaccctggtgcaggtggacgtgaag
ccagtttgcaagcctggctggcaagactggaccaaaaggatcgagtaccagcctggctcg
gggagcgtgcccttgttccccagcatccacctggagacgtgtgacggtgccgtgtcctcc
ctccaggtcaccacggagctgcagaccaattacattggcaagggctgtgaccgggagacc
tattctgagaaatctcttcagaaactctgtggagcctcctcgggcatcattgacctccta
ccgtcccccagtgctgccaccaactggacagcaggactgctggtggacagcagtgagatg
atcttcaagtttgacggcaggcagggtgccaagatcccagatgggattgtgcccaagaac
ctgacggaccagttcaccatcaccatgtggatgaagcacggccccagccctggcgtgaga
gccgagaaggagaccatcctctgcaactcagacaaaaccgagatgaaccggcatcactac
gcgctctacgtgcacaactgccgcctcgtcttcctcctgcggaaggacttcgaccaggcc
gacaccttccgccccgccgagttccactggaagctggaccagatttgtgacaaagagtgg
cattactatgtcatcaatgtggagtttcctgtggttacgctgtacatggatggagccaca
tatgagccctacctggtgaccaacgactggcccattcacccgtctcacatagccatgcaa
cttactgtcggtgcttgttggcaagggggagaagtcgccaaaccccggtttgcgcagttc
ttccacggcagcctggccagcctcaccatccgccctggcaagatggaaagtcagaaggtg
atttcctgcttgcaggcctgcaaggaagggctggatattaactccttagagagcctcggg
caaggaataaagtatcacttcaacccctcgcagtccatcctggtgatggaaggggacgac
attgggaacgtcaaccgcgccctccagaaggtgtcctacatcaactccaggcagttcccg
acggcaggcgtgcggcgcctcagagtgtcctccaaagtacagtgctttggggaagacgtg
tgcatcagcatccctgatgtggatgcttatgtgatggtcctgcaggccatcgagccccag
atcaccctccagggcacagatcgcttctggagacctgcctcccagtttgaaagctccaga
ggagtgatcctcttccccgacatcaaaatcgtgagcaccttcgccaagactgaggctcct
ggggacgtgaaaagcacagctcccaaatcggcagtcctagaagaaatgcttcacaactta
gacttctgtgacattctggtgcttggaggggacttggaccctcggcaggagtgcttggag
ctcagccacagtgagctgcaccagcgacacctggatgccaccaactccactgcaggctat
tctatctatggtgtgggctccatgagccgctacgagcaggttctgcgtcacatccgctac
cgcaactggcacccgacttccctggacacccggcggttccggatcaagtgctcagagctc
aacgggcgctacacgagcaacgagttcaacttggaggtcagtgtcctccacgaagtcaga
gcctcagacaaggagcatgtcaaccaccttattgtgcagcctcccttcctccagtctgtc
catcaccccgagtcccacagcagcatccagcgcagttcagtggtcccgagcatcgccaca
gtggtcatcatcatctccgtgtgcatgctagtgtttgtggtggccatgggcgtgtaccga
gtgcggattgcccaccagcacttcatgcaggagaccgaggctgccaaggaggccgagatg
gactgggacgactctgcactgaccatcacggtcaaccccatggagaaacacgaagaacca
ggccacggggaagaggagagcgagggagaggaggaggaggaggaggaagcagaggaagat
gtgagctccagcagcagcgactctgacgacagcgaagaggaggaggaggaggggatgggc
agaggcaggcacgagcggagtggcgccaggcaagcccagctagagtgggatgactccacc
ctcccctactag
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