Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961076
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Entry
101961076 CDS
T10664
Symbol
Sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1 isoform X1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101961076 (Sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
iti03041
]
101961076 (Sart1)
04121 Ubiquitin system [BR:
iti04121
]
101961076 (Sart1)
Spliceosome [BR:
iti03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
101961076 (Sart1)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101961076 (Sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
101961076
NCBI-ProteinID:
XP_005333463
UniProt:
A0A287CYR9
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MGSSKKHRGEKEAAGSTAAAGTGGTTEQPPRHREHKKHKHRSGGGGSSGGERRKRSRERG
GERGSGRRGAEAEARSSAHGRERSQAEPSERRVKREKRDDGYEAAASSKTSSGDASSLSI
EETNKLRAKLGLKPLEVNAVKKEAGTKEEPVAADVINPMAIRQREELREKLAAAKEKRLL
NQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEEE
FGQRRQDLYSARDLQGLTVEHAIDSFREGETVILTLKDKGVLQEEEDVLVNVNLVDKERA
EKNVELRKKKPDYLPYAEDESVDDLAQQKPRSILAKYDEELEGERPHSFRLEQGGTADGV
RERELEEIRAKLRLQAQSLSSVGPRVASEYLTPEEMVTFKKTKRRVKKIRKKEKEVIVRA
DDLLPLGDQTQDGDFGSRLRGRGRRRVPEVEEAAAPEDEEKEPVPQPPPSDDTRVENMDI
SDDEDGGALPSGSPEVLEEDEAELELQKQLEKGRRLRQLQQLRDSGEKVVEIVKKLESRQ
RGWEEEEDPERKGAIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSANGGS
ESDGEENIGWSTVNLDEEKQQQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETTVQ
KVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVDET
GRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQ
KAQKTPYIVLSGSGKSMNANTITK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggggtcttcaaagaagcaccgcggagagaaagaggcggccgggagcacggcggcggcc
ggcactggggggaccaccgagcagccgccgcggcatcgggagcacaagaaacacaagcac
cggagtggcggtggcggcagcagcggcggtgaacgacggaagcggagccgggaacgtggg
ggcgagcgcgggagcgggcggcgcggggccgaagccgaagcccgcagcagcgcgcacggg
cgggagcgcagccaggccgagccctccgagcggcgcgtgaagcgggagaagcgcgatgat
ggctacgaggccgctgccagctccaaaactagctcaggagatgcctcatcgcttagcatt
gaggagaccaataaactccgggcgaagttggggctgaaacccttggaggtcaatgccgtc
aagaaagaggcgggcaccaaggaggagcccgtggcggctgatgtcatcaaccccatggcc
atacgacagcgagaagagctccgggagaagctagcagctgccaaggaaaagcgcctactg
aatcaaaagttggggaagataaagacactgggggaagatgacccctggctggatgatact
gcagcctggatcgagaggagtcgacagctgcagaaggagaaggatttggcagagaagagg
gcgaaactgctggaggagatggaccaagagtttggtgtcagcactctggtggaggaggag
tttgggcagaggcgacaggacctgtacagtgctcgggacctgcagggcctcactgtggaa
catgccattgattccttccgagaaggggagactgtgatccttaccctcaaggacaaaggt
gtgctgcaggaagaggaggatgtgctggtgaacgtgaacctggtcgataaggagcgggca
gagaagaacgtagagctgcgtaagaagaagcctgactacctgccctacgccgaggacgag
agtgtggatgacctggcacagcaaaaacctcgctctatcctggccaagtatgacgaggag
ctggaaggtgagcggccacactcctttcgtctggagcaaggcggcaccgccgatggtgtg
cgggagcgggagctggaagagatcagggccaagctgcggctgcaggctcagtccctgagc
tctgtggggccccgcgtggcctcagagtacctgacacctgaggagatggtgacctttaaa
aagaccaagcggagggtgaagaaaatccgcaagaaggagaaggaagtgatagtgcgggcg
gacgacttgctgcctcttggagaccagactcaagacggggactttggttccagactacgg
ggccggggtcggcgccgagtgcctgaagtggaggaggcggcagccccagaggatgaggag
aaggagcctgtgccccagcccccgccgtcagatgacacccgtgtggagaacatggacatc
agtgacgatgaggatggaggagctctgccgtcagggtctccagaggtgctggaagaggac
gaggcggagctggagctgcagaagcagctggagaaggggcgtcggctgcggcagctacag
cagctgcgggacagcggggagaaggtggtggagattgtgaagaagttggagtctcgccag
cgaggctgggaggaggaggaggatcctgagcgaaagggggccatcgtgttcaacgccacc
tccgagttctgccgcaccctaggggaaatccccacctatggtctggctggcaaccgggag
gagcaggaggaactcatggactttgaacgggacgaggagcgctctgccaatggaggctcg
gaatcggatggggaggagaacatcggctggagcaccgtcaacctggatgaggagaagcag
cagcaggacttctctgcctcctccaccaccatcctggatgaggaacccatcgtgaacaga
gggctggctgctgccctgctgctctgccagaacaaagggctgctggagaccacagtgcag
aaggtagcccgggtgaaggcccccaacaagtcccttccctcagctgtgtattgcatcgag
gacaagatggccatcgatgacaagtacagccggcgggaggagtaccgaggcttcacccag
gacttcaaggagaaggacggctacaagcctgatgttaagatcgagtatgtggatgagacg
ggccggaaactcacacccaaggaggctttccggcagctgtcccaccgcttccatgggaaa
ggctcaggcaagatgaagacagaacgacggatgaagaagctggatgaggaggcgctcctg
aagaagatgagctccagtgacacgcccctgggcaccgtggctttgctccaggagaagcag
aaggcccagaagaccccatacattgtgctcagtggcagcggcaagagcatgaacgcgaac
accatcaccaagtga
DBGET
integrated database retrieval system
