Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961145
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Entry
101961145 CDS
T10664
Symbol
Nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101961145 (Nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101961145 (Nipbl)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
101961145 (Nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
101961145
NCBI-ProteinID:
XP_005325687
UniProt:
I3MNZ5
LinkDB
All DBs
Position
Unknown
AA seq
2803 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNARIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQMQQASVSSPIVAGGLRNIHDNKVSGPLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSTMRNAAPFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
PLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQSEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
SQQEQTAFLPANQVPVLQQNTSVATKQPQTSVVQNQQQVSQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVDSQASITQDSDSIKKPEEIKQCNDAPVSVLQEDIIGNLKSTPENHPETP
KKKSDPEFPKSEIKQNESRLSESKPNENRLVETNSSESKLETKIETQTEELKQNESRTIE
PKQNESTIVEPKQNENRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKSDG
RPETPKQKGDGRPETPKQKGEGRPETPKQKNEGRPETPKHRHENRRDSGKPSAEKKPEVS
KHKQDIKSDSPRVKSERAEALKQRPDGRSISESLRRDHDSKQKSDDRGESERHRGDQSRI
RRPETLRSSSRNEHGIKTDGSKTDKLERKHRHESGDSRERPSSGEQKSRPDSPRVKQGDS
NKSRPDKPGFKSPNSKDDKRTEGNRSKVDGNKAHPDNKAEFPSYLLGGRSGALKNFVIPK
IKRDKDGNITQETKKMDLKGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDR
EDKSRSSLKSMKNKPTKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVN
EKPKYAEISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHEGRRS
SGGGRYRNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFK
RFTASIENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTD
KTVKVLNILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTS
PNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQ
RVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTA
VFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDMDGEPMYIQMVTALVLQLIQC
VVHLPSSEKDSNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRP
LFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARL
RKDAVTSKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQW
FRDTTLETEKAMKSQKDEESSEGTHHAKEIETTGQIMHRAENRKKFLRSIIKTTPSQFST
LKMNSDTVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVV
AVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDT
GISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPH
NDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVE
HILKYEESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQND
FMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVT
QNFKFVWACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLED
FKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNNIL
SDKNSSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQ
LYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQ
QLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIR
GNRQHRRAFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVS
GSNLLQSFKESMVKDKRKERKSSPSKENESSESEEEVSRPRKSRKRVDSDSDSDSEDDIN
SVMKCLPENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAI
NRKTGVHFHPKQTLDFLRSDMANSKITEDVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVS
ASTNARNKAITSLLGGGSPKNNTAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQM
NESVDVMDVIAICCPKYKDRPQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVP
WVDTIKESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8412 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccataactactcttgcggggattgctagtctaaca
gacctcctgaaccagctgcctcttccatctcctttacctgctacaactacaaagagcctt
ctctttaatgcacgaatagcagaagaggtgaactgccttttggcctgtagggatgataat
ttggtttcacagcttgtccatagcctcaatcaggtatcaacagatcacatagagttgaaa
gataaccttggcagtgatgatcctgaaggcgatataccagtcttattgcaggcggtcctg
gcaaggagtcctaatgttttcagggagaaaagcatgcagaacagatatgtacaaagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtagtcctgcatcttcc
aattatcaacaaaccactatctcacatagcccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaatagcccagtgcctagtccatatgcccca
caaagtcctgcaggatacatgccatattctcatccttcaagttacacaacacatccacag
atgcagcaagcatcagtatcaagtcccattgttgcaggtggtttgagaaacatacatgat
aataaagtgtctggtccgttatctggcaattcagctaatcatcatgctgataatcctaga
catggctcaagtgacgactacctacacatggtgcacaggctaagtagtgacgatggagat
tcttcaacaatgagaaatgctgcaccttttcctttgaggtctccacagccagtatgctcc
cctgctggaagcgatggaacccctaaaggatcaagaccacctttaattctacaatctcag
cctctaccttgttcatcacctcgggatgttccaccagacatcttgttagattctccagaa
agaaaacaaaagaaacaaaagaaaatgaaattaggcaaggatgaaaaagaccagagtgag
aaagctgcaatgtatgatataattagttctccatccaaggactctactaaacttacatta
agactttctcgtgttaggtcttcagacatggaccagcaagaggatatgctttctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtacccaggacagact
tcaaaaacacccattactccacaggatgtaaaccgcccactaaacgctgctcagtgtttg
tcacagcaagaacaaacagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttcagttgctacaaaacaaccccagacttctgtggtacagaatcagcaacaggtatca
caacagggacctatatatgatgaagtggaattggatgcactggctgaaattgaacgaata
gagagggaatctgctattgaaagggagcgcttttcaaaagaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aatagaccagcttctcaggagacgggttctacgggaaatgggtcaaggccagcattaatg
gttagcattgatcttcatcaggcaggaagagtggactctcaggcttctataactcaggat
tcagactccataaaaaagcctgaagaaataaaacaatgtaatgatgcacccgtttctgtt
cttcaggaagatattattggaaatcttaaatctacaccagaaaaccatcctgaaacacct
aaaaaaaagtctgatcctgagtttcctaaaagtgaaataaaacaaaacgaaagtaggtta
tcagaatctaaaccaaatgaaaaccgattggtggagacaaattcaagtgaaagtaagtta
gaaactaaaattgagacccaaacagaagaacttaaacagaatgagagcagaactatcgaa
cctaaacaaaatgagagcaccatagttgaacctaaacagaatgaaaatagactctctgac
acaaaaccaaatgacaacaaacaaaacaatggcaggtcagaaacaacaaaatcaagacct
gaaaccccaaagcaaaagggtgaaagtcgacccgaaactccaaaacaaaagagtgatggg
cgtcctgaaaccccaaaacagaagggtgatggacggcctgaaactccaaagcagaaaggt
gagggccggcctgaaactccaaagcaaaaaaatgaaggccggcctgaaacaccaaaacac
aggcatgaaaataggagggattctggaaagccatcagcagagaaaaaacctgaagtgtca
aaacataaacaggatattaaatctgattcacctcgggtaaaatcagaaagagctgaagcc
ttaaagcagagacctgatgggcgatcaatttctgagtcgctaagacgtgaccatgatagt
aaacaaaaatcagatgacaggggtgagtcagaacgacatcgaggggatcagtctaggatt
cgaagaccagaaacattgagatcctctagtagaaatgaacatggcattaaaactgatggt
tcaaaaactgataaactagaaagaaaacacaggcatgaatcaggggactcaagggaaaga
ccatcttctggggaacaaaaatcaagacctgacagtcctcgtgttaaacaaggagattct
aataaatcaagacctgataaacctggttttaaatcaccaaatagtaaagatgacaaaagg
acagaaggtaacagaagtaaagtagatggtaataaagcacaccctgacaataaggcagaa
tttccaagttatttgttggggggcaggtctggtgcattgaaaaattttgtcattccaaaa
atcaagagggataaagatggcaatattactcaggagacaaagaaaatggacttgaaagga
gagcagaaagacaaagtagaaaaaatgggattagttgaagatcttaataaaggagctaag
cctgtggtggttctgcaaaaactgtctttggatgatgttcagaaactaattaaagataga
gaggataaatcaagaagttcccttaagtctatgaagaataagcctacaaagtcaaataaa
ggtagtatagatcaatcagtgttaaaagaattaccccctgaactcctggcagaaattgaa
tccaccatgccactttgtgaacgtgtgaaaatgaacaaacgcaagcgtagcacagtaaat
gaaaagccaaaatatgctgaaatcagttcagatgaagataatgatagtgatgaagctttt
gaatcctctaggaaacgacataaaaaagatgatgataaagcttgggaatatgaagaacgt
gacagaagaagctctggggatcataggagaagtggccactctcatgaaggaagaaggagt
tcaggtggtggtcgttatcgaaaccgaagtccatcagattctgacatggaagattattct
cctcctcccagccttagtgaggtcgctagaaaaatgaagaaaaaggaaaaacagaagaaa
aggaaagcttatgaaccaaaactaacacctgaagaaatgatggactcttcaacttttaag
agattcacagcatcaatagagaatattttggataatttggaagatatggattttactgca
tttggtgatgatgatgaaattcctcaggaactgctcttgggaaaacatcaacttaatgaa
ctcggcagtgaatccgctaaaattaaagcaatgggtataatggataagctttcaactgat
aaaactgtgaaagtcctaaatatcttggagaaaaatattcaggatggatcaaaactctcc
actttgttaaatcacaataatgataccgaagaagaagaaaggttatggagagaccttatt
atggagagagttacaaaatcagcagatgcctgtcttacaactatcaacattatgacatcc
cctaacatgccaaaagctgtatacattgaagatgtaatagaaagagttatacagtacact
aaatttcatttgcaaaatacactttatcctcagtatgatcctgtttacagattagatcct
catggaggagggttattaagttcaaaagccaaacgagctaaatgttccactcataagcag
agagtaatagtaatgctttataacaaagtttgtgacattgttagcagcctgtcagaattg
ctagagatacaacttcttacagacacaacaattcttcaggtttcatccatgggaataaca
ccattttttgtggaaaatgtcagtgaactacagttgtgtgccattaaattagtcactgca
gtattctcaaggtatgaaaaacataggcagttaattttggaagaaatttttacttcactt
gcaagattaccaaccagcaagaggagtttaaggaacttcaggttaaatagtagtgatatg
gatggagaacctatgtatattcagatggttacggctctggttttacaacttattcagtgt
gtagtacatttaccatcatcagagaaggactctaattcagaagaagactcaaataaaaaa
gttgaccaggatgttgtcattaccaactcttatgaaacagctatgcgaacagcccaaaac
ttcctttccatcttccttaaaaaatgtggtagtaagcaaggtgaagaagattatagacca
ctctttgaaaattttgttcaagaccttctttcaacagtcaataagcctgaatggccagct
gccgaactactccttagtttgttagggagactgttggttcatcagttcagtaataagtca
acagaaatggctttaagagtggcatctcttgattatcttggaactgttgctgcacgacta
aggaaagatgctgttacaagcaaaatggatcaaggctctattgaacgaattttaaaacag
gtttctggaggagaagatgaaatccagcaattgcaaaaagcattgcttgattacttggat
gagaacactgaaactgacccttcactagtgttttctcgtaaattctatatagcccagtgg
tttcgtgacacaactctggaaacagagaaagcaatgaaatcacaaaaagatgaagaatca
tctgaaggaacacatcatgcaaaagaaattgagacaactggtcaaattatgcatcgagct
gaaaaccggaaaaagtttcttagaagcattatcaaaaccacaccgtctcagttcagcaca
ttaaagatgaactctgacaccgtggactatgatgatgcttgcttgattgttcgatacttg
gcctctatgaggccgtttgcccagagctttgatatttatttgacacagatacttcgagtt
cttggtgaaaatgcaattgctgttcgaacaaaagccatgaagtgtttatccgaagttgtt
gctgtagaccccagtattctagcaaggcttgatatgcagcgaggagttcatggacgactg
atggataattccactagtgttcgagaagcagcagtagaattactaggtcgatttgtcctt
tgtcgacctcagcttgctgaacagtattatgatatgctgattgaaagaatattggatact
ggtatcagcgtcaggaaaagggtaataaagattctaagagacatctgtattgaacaacca
acatttccaaaaattacagaaatgtgtgtaaaaatgattcgcagagtcaatgatgaagaa
ggcataaagaaattagtaaatgaaacattccaaaaactctggtttactccaactccacac
aatgacaaagaagcaatgacaaggaaaattttaaacatcactgatgtggttgcagcatgc
agagatactggatatgactggtttgaacaacttcttcaaaatttgttgaagtccgaagag
gattcctcatataaacctgtgaagaaagcttgtactcaacttgttgataacctagttgag
cacattcttaaatatgaggaatctctagctgactctgacaataaaggtgtgaattctgga
agattggtagcttgcataaccactttattcttattcagcaaaataagaccacaactcatg
gttaaacatgccatgactatgcaaccataccttaccactaagtgtagtacacaaaatgat
ttcatggttatctgcaatgttgcaaaaatcctagaactagttgtaccactgatggagcat
ccaagtgaaactttccttgccactattgaagaagatctaatgaagcttatcatcaaatat
ggcatgactgtagtgcagcattgtgtgagctgtcttggagctgttgttaataaagtaaca
caaaattttaaatttgtgtgggcctgtttcaatagatactatggtgccatttcaaaatta
aaaagtcaacaccaagaagacccaaataacacttcacttctaacaaataagccagcactt
cttagatccctttttactgttggagcactgtgtcggcattttgattttgacctagaggat
tttaaaggcaacagtaaggttaacataaaggacaaagtacttgaactgttaatgtatttt
acaaaacattcagatgaagaagtacaaacaaaagccatcattggtctaggatttgccttt
attcaacatccaagtctaatgtttgagcaagaagtgaagaatctgtataataatatttta
tctgataagaactcctcagtaaacttaaaaatacaagtgttaaaaaacctccagacctac
ctacaagaagaagatacacgtatgcagcaagcagatagagactggaagaaagttgcaaaa
caggaagacttaaaagaaatgggtgatgtttcctcagggatgagtagttccatcatgcaa
ctttacctcaaacaggtgcttgaggcgttttttcacacccagtcaagtgtacgccacttt
gccctaaatgtcattgctttgactctaaaccaaggtcttattcatccagttcagtgtgtt
ccatatttaattgctatgggcacagacccagaacctgctatgcggaacaaggctgatcag
cagcttgtggaaatagacaaaaaatatgctggattcattcatatgaaagcagtggctggt
atgaagatgtcttaccaggtacaacaggcaatcaacacgtgcctaaaagatcctgtaagg
ggtttcagacaagatgagtcctctagtgctttgtgttcacacctttactccatgatccgt
ggaaatcgccaacatagacgagcctttcttatttctttactcaacctctttgatgacaca
gcaaaaacagaagtgactatgctcttgtatatagcagacaatctagcctgttttccatac
cagacacaggaagagccgttgtttataatgcatcatatagacattacactctcagtttct
ggtagtaacctactgcagtcattcaaggagtctatggtaaaggacaaaaggaaagagaga
aaatcatcacctagtaaggaaaatgagtcaagcgagagtgaagaagaagtttccaggcct
cggaagtcacggaaacgtgtagattcggattcagattcagattcagaagatgatataaat
tcagtgatgaaatgtttgccagaaaattcagctcctttaattgaatttgcaaatgtctcc
cagggtattttattgcttctcatgttaaaacaacatttgaagaatctctgtggattttct
gatagtaaaatccagaaatactctccatctgagtctgcaaaagtatacgataaagcaatt
aaccgaaaaacaggagttcattttcatcccaaacaaacactggacttcctgcggagtgat
atggctaattccaaaatcactgaagatgtgaagaggagtatagtaaaacagtatctagat
ttcaaacttctcatggaacatctagaccctgatgaagaagaggaagaaggagaggtgtca
gctagcacaaatgctcggaacaaagcaattacctcgctgcttggaggaggcagccctaaa
aataatacagcagagacagaagatgatgaaagtgatggggaggatagaggaggaggcact
tcagggtcattgagaaggtcaaaacgaaattcagactctacggagttggcagcacagatg
aatgaaagtgttgacgtcatggatgtcatcgctatttgctgtccaaagtacaaagatcga
ccacaaattgcaagagtagtacagaaaaccagcaatggcttcagtgttcagtggatggca
ggctcctacagtggctcctggactgaggctaagcgccgtgatggccgcaaactggtgcct
tgggtagacactattaaagagtcagacattatttacaaaaaaattgctctaacgagtgct
aataagctgactaataaagttgttcagactttacgatccctgtatgccgccaaggatggg
acttccagctaa
DBGET
integrated database retrieval system
