Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961271
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Entry
101961271 CDS
T10664
Symbol
Hcn2
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04024
cAMP signaling pathway
iti04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
101961271 (Hcn2)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101961271 (Hcn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101961271 (Hcn2)
Ion channels [BR:
iti04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
101961271 (Hcn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Microp_apicomplexa_15
Ion_trans_2
TMEM171
Motif
Other DBs
NCBI-GeneID:
101961271
NCBI-ProteinID:
XP_005332230
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
WLRQRATGQGLSAEGRRGRIEGNVGADEAVEREEGGREGRPGRTRPGETCWEGVKRSRSR
LLQSPPEPLDGRVWIAWKGAQNGFYWDFTMLLFMVGNLIIIPVGITFFKDETTAPWIVFN
VVSDTFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLRSWFVVDFVSSIPVDYIFLIV
EKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIC
NLISMMLLLCHWDGCLQFLVPMLQDFPSNCWVSINNMVNHSWSELYSFALFKAMSHMLCI
GYGRQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMS
FHKLPADFRQKIHDYYEHRYQGKMFDEDSILGELNSPLREEIVNFNCRKLVASMPLFANA
DPNFVTAMLTKLKFEVFQPGDYIIREGTVGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFG
EICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNS
ILLHKVQHDLSSGVFNNQENAIIQEIVKYDREMVQQAELGQRVGLFPPPPPPQVTSAIAT
LQQAVAMSFCPQVARPLVGPLALGSPRLLRRGPPAPVPTAAVPGASPGPAPAASPPGAPA
SPRALRTSPYSGAPSSPAAPRAGAVLPARRLSRASRPLSASQPSLPHGAPGPGPTTSVRP
ASSSTPRLGPAPTPRAAGPSPDRRDSASPSGLPLDSARSRLSSNL
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
tggctcaggcagcgggccacaggccagggtctaagcgcggaggggcggagaggacgaata
gaggggaacgtgggcgcggatgaggcagtggagagggaggaaggagggagggaagggcgc
ccgggaaggacgcgcccgggcgagacctgctgggaaggggttaaacggtcacggagtagg
ctcctacagtcccctcctgagccgctggacgggcgtgtctggatagcctggaagggggcg
caaaacgggttctactgggacttcaccatgctgctgttcatggtgggaaacctgatcatc
atccccgtgggcatcaccttcttcaaggatgagaccactgccccgtggatcgtcttcaac
gtggtctcagacaccttcttcctcatggacctggtgctcaacttccgcacgggcatcgtg
attgaggacaacacggagatcatcctggaccccgagaagatcaagaagaagtacctgcgc
tcgtggttcgtggtggacttcgtgtcgtccatcccggtggactacatcttcctcatcgtg
gagaagggcatcgactccgaggtctacaagacggcccgcgccctgcgcatcgtgcgcttc
accaagatcctcagcctcctgcggctgctgcgcctgtcgcggctcatccgttacatccac
cagtgggaggagatcttccacatgacctacgacctggccagtgcggtgatgcgcatctgc
aacctcatcagcatgatgctgctgctgtgccactgggacggctgcctgcagttcctggtg
cccatgctgcaggacttccccagcaactgctgggtgtccatcaacaacatggtgaaccac
tcctggagcgagctgtactccttcgcgctcttcaaggccatgagccacatgctctgcatc
gggtacgggcggcaggcccccgagagcatgacggacatctggctgaccatgctgagcatg
atcgtgggcgccacctgctacgccatgttcatcggccacgccacggccctcatccagtcg
ctggactcttcgaggcgccagtaccaggagaagtacaagcaggtggagcagtacatgtcc
ttccacaagctgcccgccgacttccgccagaagatccacgactattacgagcaccgctac
caaggcaagatgttcgatgaggacagcatcctgggggagctcaacagccccctacgggag
gagatcgtcaacttcaactgccgcaagctggtggcctccatgccgctcttcgccaatgct
gaccctaactttgtgacagccatgctgaccaagctcaagttcgaggtcttccagccggga
gactacatcatccgtgaggggactgtgggcaagaagatgtacttcatccagcatggtgtg
gtcagcgtgctcaccaagggcaacaaggagatgaagctgtctgatggctcctacttcggg
gagatctgcctgcttacacggggccggcgcacggccagcgtgcgggccgacacctactgc
cgcctctattcgctgagtgtggacaacttcaatgaggtgctggaggagtaccccatgatg
cggcgtgcctttgagacagtggccatcgaccgcctggaccgcatcggaaagaagaactcg
atcctgctgcacaaggtacagcacgacctcagctcgggcgtgttcaacaaccaggagaac
gccatcatccaggagattgtcaagtacgaccgcgagatggtgcagcaggcagagctgggc
cagcgcgttggcctcttcccgccgcctccgccgccgcaggtcacctctgccatcgccaca
ctgcagcaggcggtggccatgagcttctgcccgcaagtggcacgcccacttgtggggccc
ttggctctcggctcaccgcgcctcttgcgccgcggtcccccggcaccggtgcctaccgca
gctgtccctggagcctcaccggggcccgcccctgccgccagcccccctggcgcacctgcc
agcccgcgggcgctgcggacctcaccctacagcggagctcccagctcccctgctgccccc
cgggccggggctgtgttgcctgcacgccgcctgagccgcgcgtcacgcccactgtcggcc
tcacagccctccttgccccacggagcacctggccccggacccacgacctcagtgcgccca
gccagcagctccacgccaaggctagggccagcacccaccccccgggccgcggggcccagc
ccagaccgcagggactcagcctcgcccagcggcctcccgctggactctgcgcgctcacgc
ctctcatccaatttgtga
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