Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961352
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Entry
101961352 CDS
T10664
Name
(RefSeq) ATP-binding cassette sub-family A member 9 isoform X1
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101961352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iti02000
]
101961352
Transporters [BR:
iti02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
101961352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_22
AAA_29
SMC_N
cobW
AAA_23
Motif
Other DBs
NCBI-GeneID:
101961352
NCBI-ProteinID:
XP_005328307
LinkDB
All DBs
Position
Unknown
AA seq
1626 aa
AA seq
DB search
MSKRRISMGQQIWALLCKNCLKKWRMKRETSLEWLFSFLLILFAYLLSSNLHQINDSPQK
SAVDLNLGRVDKFNDSNYVIAFAPESKTTQEIMNKAASAPFMKGRTIIGWPDENSMNELD
LNYSVDVVRVIFNDMFSYHLKFSWGYRIPKMREHKDHSAHCQAIAKKITCESSVFWEKGF
VAFQAAINAAIIEVAVNHSVMDKLMSVTGLNMEILPFIAQGGIATDFFIFFCIISFSSFI
YYVSVNVAQERQFIKSLMTMMGLRESAFWLSWGLIYASFILIMAILMALIIKSAQVVILT
GFVVVFILFLFYGLSLITLAFLMSVLIKKPFLTGLAIFLLIIFWGSLGFTALYRHLPAFL
EWTFCLLSPFAFTAGMAQLIHLDYDVNSNVHLDSSNSSYLIIATLFMLVFDALLYLVLTL
YFDKILPNKFGHSHSPWFFLKSSFWFQHQGANHMVLENETPSDPSWDDSFEPVSPEFHGK
EAIRINNLKKEFTGKHEKVEALRGLGLDIYEGQITALLGHSGAGKTTLLNILSGLSAPTS
GSVTIYNHTLSEMADFETVSKLTGVCPQSNVQFGFLTVRENLRLFAKIKGILPHEVEQEV
QRVLQALEMESIQDILAQNISGGQKRKLTFGIAILGDPQVLLLDEPTAGLDPLSRHRMWN
LLKERKSDRVILFSTQFMDEADILADRKVFISSGRLKCAGSSLFLKKRWGIGYQLSLHLN
EMCDPESITSLVKQHIPDAKLTAQSEERLIYILPLETTSKFPDLYRDLDRCSNQGIENYG
VSMTTLNEVFLKLEGKSTVDESDIGNWQQLQGDGAKDRGNLVELEQVLTSLYATKKTASG
MALWRQQVCAIAKVRFLMLKKERKSLLTMLFLFGISFIPQLLEHLFYELYNKSYSWGLSP
NMYFLSPGQQPQDPLTLLLVINKTGSSIDNFIHSLRRQDIALEVDAFGTRNGTNEPFYNG
AITVLGDEKDHRFSIACNTKRLNCFPVLMDIISNGLLGIFNSSERIQTDRSTFYEEQMPS
EYQYLSGAFFWLPVVACFIPYIAMSSIGDYKRKVHSQLWISGLYPSAYWFGQALVDIPLY
FLILLIMQIMDYVFSSEEIIIIIQNLSIQVLCSIGYVSSLVFLTYVISFIFRNGRKNSGL
WSFFFLIVTVFTTVANDLNEYAFLGLLFSTILVPPFTMIGSLLIYSEISFDSMDSSEASD
SPVLFLALLIPYLHCFIFLFVLGCLERNFRRKSMRKDPVFRISPRSGDVSPNPEDPEGED
EDVKIERTRTANAMAILDLPQKPVIIASCLRKEYAGKKKNCFSRPKKKIATRNVSFCVKK
GEVIGLLGHNGAGKSTTIKMITGDTKPTSGQVILKGSCGGDVPGFLGYCPQENVLWPSLT
VREHLEVYAAVKGLKKRDASAIITQLVDAFKLQDQLKGPVNTLSEGIKRKLCFLLSILGN
PSVVLLDEPSTGMDPEGQQHMWQAIRATFRNSERGALLTTHYMAEAEAVCDRVAIMVSGR
LRCIGSIQHLKSKFGKDYLLEMKVKTPEHVESLHAEILKLFPQAARQERFSSLLVYKLPV
EDVQPLSQAFFKLEIVKQSFNLEEYSFSQSTLEQVFLELSKEQELDDFDNELDLSVKWKL
LPQEEL
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagagacgtataagcatgggtcagcagatatgggctcttctctgcaaaaactgt
cttaaaaagtggaggatgaaaagagagacctcactggaatggcttttctcatttctttta
atactatttgcatacctcctttcttccaatttacatcaaattaatgactctccgcaaaag
tctgcagtggatctgaatctgggacgtgtagataaatttaatgactctaattatgttatt
gcatttgcacccgaatccaaaactacccaagaaataatgaacaaggcggcttcagctcca
ttcatgaaaggaagaacaatcattggatggcctgatgaaaatagcatgaatgagttggat
ttaaattattcagtggacgtggtgagagtcatctttaatgatatgttctcatatcatttg
aaattttcttggggatatagaatccctaagatgagagaacacaaggaccattcagctcac
tgtcaagcaattgccaagaaaatcacctgtgaaagttcagtgttctgggagaaaggcttc
gtggcgttccaggctgccattaatgctgcaatcatagaagttgcagtgaatcattctgtg
atggacaagctgatgtcagttactggattaaacatggagatactaccttttattgctcaa
ggaggaattgcaactgattttttcattttcttctgcattatttctttttcttcatttata
tattacgtctcagtcaacgttgcacaggagaggcaattcataaagtcgctgatgacaatg
atgggacttcgagagtcggcattctggctttcctggggtttgatatatgccagcttcatc
cttatcatggccattttgatggcccttattataaagtctgcccaagttgtcatcctaact
ggtttcgtggtggtctttattctgtttctcttctacggcctgtccttgataactctggct
ttcttgatgagtgtactgataaagaaacctttcctgaccggcctggccatctttctcctt
atcatcttttgggggagcctaggattcacagcattgtacagacatcttcctgcatttttg
gaatggaccttctgtcttctaagcccctttgccttcactgctggaatggcccagcttata
catttggactatgatgtgaattctaatgtccatttggattcttcaaactcctcatatcta
ataatagctactctcttcatgttggtctttgatgctcttctctatttggtattgacatta
tattttgacaaaattttacccaacaaatttggacatagtcattctccctggtttttcctg
aagtcttcgttttggtttcaacaccaaggagctaatcacatggtccttgagaatgaaaca
ccttctgacccttcatgggatgactcttttgaaccagtgtctccagaatttcatgggaaa
gaagccatcagaatcaataatcttaaaaaagaatttacaggaaaacatgaaaaagtagaa
gctttaagaggtctgggattggacatatacgaaggccagatcactgccctccttggtcac
agtggagctgggaaaaccacgctgttgaacatactgagtggactgtcagccccaacgtca
ggctctgtcaccatctataatcacacactttcagaaatggctgattttgaaactgtcagc
aagctcactggagtgtgtccacaatccaatgtacaatttggcttccttactgtgagagaa
aacctcaggctgtttgctaaaataaaagggattctgccacatgaagtggagcaagaggta
caacgagttttacaggccttagagatggaaagtattcaagacattcttgctcaaaatata
agtggtggacaaaaaaggaaactgacttttggaattgccattttaggagatccacaggtt
ttgttattggatgaaccaactgctggattggaccctctttcaaggcatcgcatgtggaat
ctcttgaaagagaggaaatcggacagagtcatcctcttcagcacccagttcatggatgag
gctgatattctggctgacaggaaggtctttatctccagtgggaggctgaagtgtgcaggc
tcttctctgttcctgaagaagagatggggcattggctaccagttaagtttgcatctgaac
gaaatgtgtgatccagagagcataacatcactggttaagcagcatatccctgatgccaaa
ttaacagcacaaagtgaagaaagacttatctatattttgcctttggaaacgacaagcaaa
tttccagatctttacagggatcttgatagatgttccaaccaaggcattgagaattatggt
gtttccatgacaactttgaatgaggtattcctgaaattagaaggaaaatcaactgttgat
gaatcagatattggaaattggcaacaattgcaaggtgatggggcaaaagataggggaaac
cttgttgagctggaacaagtgctgacttccctctatgccacaaagaaaacagcaagtggc
atggcactctggaggcagcaggtctgcgcaatagccaaagttcgcttcctcatgttaaag
aaagaaagaaaaagcctattaaccatgttattcctttttgggattagctttatccctcaa
cttttggaacatctgttttatgagttatacaataaaagttactcttggggactgtctcca
aatatgtacttcctttcaccaggacaacaaccacaagatcctctgactcttttactggtc
atcaataaaacagggtcaagcattgataacttcatacattcgctgagacgacaggacata
gctttggaggtggatgccttcggaactagaaatggcacaaatgagccattctataatggt
gcaatcactgtgttaggggatgaaaaggatcacagattttcaatagcatgtaataccaaa
aggctgaattgctttcctgtcctcatggatattattagcaatgggctacttggaatcttt
aattcttcagagcgcattcagactgatagaagcacattttatgaagagcagatgccttcc
gagtaccagtacctgagtggcgccttcttctggctaccagtggtcgcatgtttcattcct
tacatcgcgatgagcagcatcggagactacaaaagaaaagttcattcccagctgtggatt
tctggcctctacccttctgcttactggtttggacaggcactggtggacattcccctgtac
ttcttgattctccttataatgcaaataatggattatgtgtttagctcagaggagattata
attataattcaaaacctatcaattcaggtcctgtgcagtattggatatgtctcctctctt
gttttcttgacatatgtgatctcatttatttttcgaaatggcagaaaaaatagtggcctt
tggtcatttttcttcttaattgtcactgtcttcaccacagttgctaatgatctcaatgaa
tacgcattcctagggctacttttctccaccatattagtgccacccttcactatgattggc
tctctgctaatttattctgagatttcctttgattctatggattcctcagaagcttcagat
tctcccgtgctatttctggctttgctaataccttacctccattgtttcattttccttttt
gttcttggatgtctggaaaggaacttcaggcggaaatcaatgagaaaggacccagtgttc
agaatttctccaagaagtggtgatgtttcaccaaacccagaagatcctgaaggagaagat
gaagatgttaagatagaaagaacgagaacagccaatgctatggctatcctggatctgccc
cagaaaccagtcatcattgccagctgtttgcggaaggaatatgcaggcaaaaagaaaaat
tgcttttccagaccaaagaaaaaaatcgccacaagaaacgtctctttctgtgttaaaaaa
ggtgaagttatagggctgctaggacacaatggagctgggaaaagtactaccattaagatg
ataaccggagacacaaaaccaacctcagggcaggtgattttgaaaggaagctgtggaggg
gatgttcctgggttcctggggtactgtcctcaggagaatgtgctgtggcccagcctgaca
gtgagggaacacctggaggtgtatgccgctgtgaaggggctgaagaaaagggacgcctct
gccatcattacacagttggtggatgccttcaagctgcaggaccagctaaagggtcctgtg
aatactttgtcagagggaataaagagaaagctgtgctttctgctgagcatcctggggaac
ccatcagtggtgcttctggatgagccatctactgggatggaccctgaggggcagcaacac
atgtggcaggccatccgggccacctttagaaactcagagcggggtgccctcctgaccacc
cattacatggcagaggcagaggccgtgtgtgaccgcgtggccatcatggtgtctggaagg
ctgaggtgtatcggttccattcagcacctaaaaagcaaatttggcaaagattacttgctg
gagatgaaggtgaagacccctgagcatgtggaatcccttcatgctgagatcctgaagctc
ttcccccaggctgcaaggcaggaaaggttctcctccctcctggtctataaattgcctgtt
gaggatgtgcaacctttgtcccaggctttcttcaaattggagatagtcaaacagagcttc
aacctggaggagtacagcttctcgcagtccactctggagcaggttttcctggagctctcc
aaggagcaggagctggatgactttgataatgaacttgatctctcagtcaagtggaaactt
ctcccacaggaagagctttaa
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integrated database retrieval system
