Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961500
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Entry
101961500 CDS
T10664
Symbol
Ttf1
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
101961500 (Ttf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iti03021
]
101961500 (Ttf1)
Transcription machinery [BR:
iti03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
101961500 (Ttf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
DUF6942
Motif
Other DBs
NCBI-GeneID:
101961500
NCBI-ProteinID:
XP_005321161
UniProt:
I3MAQ9
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MEGESNRFEIHTPVFDKKNKKYFAYKERPQKHAHESFRISSLEGDQLQITKSKKKKDFQL
LISSPLKKPEICDQTEKATSTNKKKKKRRKSALGVDPETGVAYVLVDKENIENTPKNLGR
DVDVVYVDISREQNSAEGCVVGEHTATESPKGGPEEPWSGARGRKSRSQPGGVAAPQGPQ
GSIVLPQPESRAQPPLFSLSLEGEISEPPMSTGKKKSKKKKRKRSSVQEWEASAEPGDLA
HHPSEEPQMAIEAEAGEGSDTLKRVRRSSAVKKAKRRRHVSAESPVESGGSSALDENSGN
TRSGSLEGESTMMEERVTVRSLEGRAQAAQGEKQVPEAQRLNPAVEEEHGLALPGDSTAR
CLSEEQRESGDSDVDLDSAVRQLQEFIPDIKDRAATTIKRMYRDDLGRFKEFKAQGIAIR
FGKFSAKENKQIEKNVQEFLSLTGIENADKLLYTDRYPEEKSAITELKRKHAFRVHIGKG
IARPWKLVYYRAKKMFDVNNYKGRYSQGDTEKLKAYHSLHGNDWKKIGAMVARSSLSVAL
KFSQISSQRNHGAWNKTETQRLIKAVEEVILKKMSPQEMEEMDSQLQENPEGRLSIVREK
LYKGISWVEVEAKVETRNWMQCKSKWTEILTKRMTNGGFVYRGVNALQAKINLIERLYEI
NVEDANEIDWEDLASAIGDVPPSYVQTKFYKLKAACVPFWQRKTFPEIIDYLYKTSLPVL
KEKLKKKMARKGTRIQTPTAPKQVFLFRDIFHSEDDSEGEDTEEQS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagagtcaaacagatttgagattcatactccagtttttgacaagaagaacaaa
aagtactttgcatataaggaaagaccccagaaacatgcccatgaaagtttcagaatctcc
tctctggaaggtgaccagcttcaaataactaagagtaagaagaaaaaagatttccagctt
ctaatttcttctcctttgaaaaaaccagaaatctgtgatcagactgaaaaggctacttct
acaaacaagaagaagaaaaagaggagaaagagtgctctgggggtagacccggaaacaggg
gttgcttatgtcctcgtggataaagaaaacattgagaacacgcccaagaacttggggaga
gacgtggatgtcgtctatgtagatatcagcagagagcaaaactcagcagaagggtgtgtg
gtgggtgagcacacggccactgagtctcctaaaggtgggccagaggagccgtggagcgga
gccagggggagaaagagtcggagccagccggggggagttgcagcaccccagggccctcaa
gggagcattgtcctgccccagccggagtcacgggcgcagccacccttgttttctctgagc
cttgaaggggaaatctcagaaccaccaatgtccactggtaaaaagaagtctaagaaaaaa
aagaggaaaaggtccagcgtgcaggagtgggaagcctcagcggagcctggggatctagct
caccatccctctgaagaacctcagatggccattgaagcagaggctggagaaggcagtgac
acactaaagagggtgagaaggtccagtgctgtgaagaaggccaagaggaggagacatgtc
tccgcggaaagccctgtggagtctggtggttcttcagcactggatgaaaactctgggaac
acgcgctctggttcactggagggcgaaagcaccatgatggaagaaagggtaacagtccgg
tccctagaggggagagcccaggccgcgcagggggagaagcaggtgccagaggcgcagagg
ttaaaccctgcagttgaggaagagcatggcttggcattgcctggggattccacggcaaga
tgtttatctgaagagcagagagagtctggtgactcagatgtggacttggattccgctgtg
aggcagctccaggagttcattcctgacataaaggacagggctgccactaccatcaagcgg
atgtaccgtgacgacttgggacggtttaaagaatttaaagctcagggtattgctattaga
tttggcaaattttctgcaaaggaaaataagcagatagagaaaaatgtgcaagaatttctg
tctctgacaggaattgaaaatgcagacaagctgctatacacagacagatacccagaggag
aagtctgccattactgaattgaaaagaaagcatgcgtttagggtgcacattggtaagggc
attgctcggccctggaaactcgtatactatcgagcaaagaagatgttcgatgtcaataat
tacaaaggcaggtatagccaaggagatacggagaagttgaaggcataccattccctccac
gggaacgactggaaaaagattggagccatggtggcccgaagcagcctctcggttgccctg
aagttctcccagatcagcagtcaaagaaatcatggtgcttggaataagacggaaacacag
aggctcatcaaggctgttgaagaggtgattttaaagaaaatgtctccccaggagatggaa
gagatggattcacagctccaagagaatcctgaaggtcgcctgtcaatcgtccgggaaaaa
ctctacaagggcatatcctgggtggaagtggaagctaaagtggaaaccagaaattggatg
cagtgcaaaagtaagtggacggaaattctgaccaagaggatgactaatggtgggtttgtg
tatcgtggagtgaatgcgctgcaggccaaaatcaaccttattgaaaggttatatgaaata
aatgtggaagacgccaatgaaatagattgggaagatcttgctagtgccataggcgatgtg
cctccatcttatgttcaaactaagttttataagttgaaggcggcctgtgttcccttttgg
cagagaaagacgtttccagagatcatcgactacctttacaagactagtctacctgtgctt
aaagaaaagttaaaaaagaagatggcgagaaaagggaccagaatccagactcccacagca
ccgaagcaggttttcctatttagagatatctttcattctgaagacgatagtgaaggagaa
gacacagaagaacaaagttaa
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