Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961504
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Entry
101961504 CDS
T10664
Symbol
Cdhr5
Name
(RefSeq) cadherin-related family member 5 isoform X2
KO
K16505
cadherin-related family member 5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101961504 (Cdhr5)
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Cadherin related
101961504 (Cdhr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
101961504
NCBI-ProteinID:
XP_021576677
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MTAAKMGAQALRWPPLLLALLTVLLGHSPGATAQTQVCSVDKTFLQVQENENITEALVNI
SVPDGQQVTLGSSSTPSAFRILENQLFLSVIPDYEENTMLEAHLECKRGDTVVTQLRVFV
VVLDVNDNAPEFPFTTKEQDVQEDTKVNSTVIPEAELQATDRDKDSTLFYTLQEVTPGAG
SFFSLLGVNRPALRLDRALDFYQWQNMTFRLLVRDTREEHQEPSHTATATLVLKVLPADL
RPPWFLPCSYSDGSICIQAQYRGAIPTGHTLLSPLILRPGPIYAVDGDRGINERVIYSII
GGNKDNTFAIDSDSGNLTMTKSVPSPMTFLLLVKGEQADLARYSVTQVTVEARQAHGSQP
HFSQSLYRGTVAPGSGSGVAVKDATSPSQPLRIWAQDPEFPDLNSAITYQITNCSEFRMA
GEMVLTATAIEQAGVFYAEVEARNTATAGVATTVVEIRVSEQEPPSTGTSPTTTPDVGAG
TSRPTTPGGGSAQTQKPGTSRPTVPGPSRSPPPSGTPGSSTGGSVPIQDDQHFSIVDMAV
LGGVLGALLLLALLGLAILIHKHYGHRLNCCSGKAAEPQPHGFDNQAFLGDQEANWAPAP
SPSPGPKSVEVPLEPPSPGSPVPEPPSTESPDPGPFASAPESPVAARAVDSPSAVRSILT
KERRPEGGYKAVWFGEDIGAEADVVVLNAPTADADGAGDSDSEDAGQGWGPRGAPAPEDD
STYI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggccaagatgggggctcaggccctgcgatggcctcccctgctgctggcgctg
ctcaccgtgctgcttggccattccccgggagccacagcccagactcaggtctgctcggtg
gacaagaccttcctccaagtgcaggagaatgaaaacatcacggaagccctggtgaacatc
tccgtcccagatggccagcaggtgaccctcggatcctcgtccaccccatccgcatttcgg
atcctagaaaaccagctctttctcagcgtgattcctgattatgaggagaatacgatgctg
gaggcacacctggagtgcaagaggggggacaccgtggtgacgcagctgagggtgtttgtg
gtggtgctggatgtcaacgacaacgccccagagttccccttcaccaccaaggagcaggac
gtgcaggaggacaccaaagtgaactctacggtcatccctgaggcagaactacaggccacg
gaccgtgacaaggacagcaccttattctacaccctacaggaagtgaccccaggtgctggc
agcttcttctcccttttgggggtgaaccgccctgccctgaggctggaccgggccctggac
ttctaccagtggcagaacatgaccttccggctgctggtgcgggacacaagggaggagcac
caggagcccagccacacagccacggccaccctggtcctgaaggtgctgcccgctgacctg
cggccaccctggttcttgccctgctcctactcagacggctccatctgcatccaggctcag
taccggggggccatccccacaggacacacactgctgtcccccctcatcctgcgtccgggg
cccatctatgctgtggacggagatcggggcatcaacgagcgggtcatctacagcattata
gggggaaacaaggacaacacatttgccatcgactcagactctggcaacctcaccatgacc
aagagtgtccccagccccatgacattcctgctactggtcaagggtgaacaggctgatctg
gcccgttactcggtgacccaggtcactgtggaggcccgccaggcccatgggagccagccc
cacttctcccagagcctgtaccgaggcactgtggcccctggctctgggtctggtgtggct
gtcaaggatgccacctccccctctcagcctctgaggatctgggctcaggaccccgagttc
ccggacttgaactcggccattacctatcaaatcaccaactgctccgagttccggatggcc
ggagagatggtgctgactgccacggcaatagagcaagccggggtcttctacgcagaggtg
gaggccaggaacacggcgactgcgggtgtagccaccactgttgttgagattcgcgtttca
gagcaggagcccccgtccacagggacttctccaacgaccacccccgatgtgggagcaggc
acgtcacgaccaaccacgcccggtgggggctcagcacagacccagaagcctgggacctct
cggcccacggtccctgggcccagcaggagccccccaccctcagggacgccaggaagcagc
acaggaggaagtgtcccaatacaggatgaccagcacttctccatagtggacatggcagtg
ctgggaggggtgctgggtgcactgctgttgttggccctcctgggcctggccatcctcatt
cacaaacactatggtcaccgactgaattgctgctctggcaaagctgcggagccccagccc
cacggctttgacaatcaggcctttctgggggaccaggaggccaactgggcacctgcccct
agccccagtccggggcccaagtctgtggaggtgccactggagccgcccagccccgggtcc
cctgtccctgagcctcccagcacggagtccccagacccaggtcccttcgccagtgcccct
gagtccccggtggccgccagggctgtggacagcccctcagcagtgagatccatcctgacc
aaggagcggcgccccgagggcggctacaaggccgtgtggttcggcgaggacattggggcc
gaggccgacgtggttgtccttaacgcacccaccgcggacgcggacggcgcgggcgactct
gacagcgaggacgctggccagggctggggtccccgcggcgcgcctgcgccggaagacgac
tccacctacatctag
DBGET
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